Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC006390.1-201ENST00000508068 283 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC107954.1-201ENST00000565906 727 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC012175.1-201ENST00000603755 531 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AC013553.2-201ENST00000604244 589 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AC007621.1-201ENST00000604544 437 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AL162730.1-201ENST00000605734 292 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC068726.1-201ENST00000610993 341 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 MIR6085-201ENST00000618314 110 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 WDR95P-201ENST00000425638 1542 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC130360.2-201ENST00000533477 1556 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 SAGE3P-201ENST00000619800 1635 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDH1Q08174 SNORD8-201ENST00000363915 110 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 RNU6-317P-201ENST00000384031 107 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 RNU1-149P-201ENST00000390870 161 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 RNU6-332P-201ENST00000391193 108 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC245036.1-201ENST00000391727 309 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 AL136131.1-201ENST00000406079 803 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 RNA5SP118-201ENST00000410385 109 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 RNU2-28P-201ENST00000410457 189 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 U3.43-201ENST00000410734 213 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 RNU2-6P-201ENST00000411404 190 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 CYP4F30P-202ENST00000420048 405 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 NME1P1-201ENST00000420914 382 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC023347.2-201ENST00000433994 462 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 MTND1P12-201ENST00000455231 147 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 RPL21P71-201ENST00000465598 459 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 RN7SL612P-201ENST00000497704 295 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC010486.1-201ENST00000511793 424 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 Y_RNA.672-201ENST00000516289 104 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC008562.1-201ENST00000521763 330 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AP005639.1-201ENST00000526939 192 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AL133399.1-201ENST00000527476 298 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDH1Q08174 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC090424.1-201ENST00000535243 736 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 AC011712.1-201ENST00000588959 234 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH1Q08174 YWHAQP7-201ENST00000603536 658 ntBASIC6.22□□□□□ -1.41
PCDH1Q08174 AP000942.4-201ENST00000604811 241 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms