Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA13P31271 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXA13P31271 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA13P31271 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA13P31271 DHX9P1-201ENST00000436565 3076 ntBASIC5.15□□□□□ -1.59
HOXA13P31271 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA13P31271 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 AC027228.2-201ENST00000567141 2154 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 CASC19-284ENST00000642142 1868 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA13P31271 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 AC093849.1-201ENST00000563631 2209 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 OR56B2P-201ENST00000317102 954 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 RNU4-27P-201ENST00000410889 139 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA13P31271 RAD23BP1-201ENST00000421404 1227 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA13P31271 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA13P31271 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA13P31271 RNU7-27P-201ENST00000459281 62 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 RPS23P7-201ENST00000466210 444 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 NIP7P2-201ENST00000485801 544 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AC083829.1-201ENST00000503756 657 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA13P31271 AC010476.1-201ENST00000519111 851 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 CIR1P1-201ENST00000524055 1133 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 KPNA2P3-201ENST00000584190 848 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AP001160.4-201ENST00000596971 382 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AC026741.1-201ENST00000605892 482 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA13P31271 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 AL035461.2-201ENST00000619201 524 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA13P31271 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 AC000374.1-201ENST00000434698 1745 ntBASIC5.14□□□□□ -1.59
HOXA13P31271 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
HOXA13P31271 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA13P31271 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HOXA13P31271 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA13P31271 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 THAP12P5-201ENST00000405864 2275 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 LINC00622-201ENST00000562811 1570 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 AC008033.1-201ENST00000216407 1162 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HOXA13P31271 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXA13P31271 RNU4-31P-201ENST00000384211 141 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 MIR320B1-201ENST00000390209 79 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC010385.1-201ENST00000412374 256 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA13P31271 AL158053.1-201ENST00000441503 453 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 RPS27P5-201ENST00000444247 244 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXA13P31271 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA13P31271 CLIC4P1-201ENST00000453177 535 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 RPS27AP17-201ENST00000463344 455 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 RN7SL385P-201ENST00000468873 276 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 NPM1P28-201ENST00000492269 840 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC025459.1-201ENST00000504072 156 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXA13P31271 OR8A2P-201ENST00000528631 952 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA13P31271 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA13P31271 ABI1P1-201ENST00000603375 1120 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AC090525.3-201ENST00000605601 189 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 MIR8084-201ENST00000614105 89 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 AL122125.1-201ENST00000616999 600 ntBASIC5.13□□□□□ -1.59
HOXA13P31271 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXA13P31271 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA13P31271 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
HOXA13P31271 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 UBBP2-201ENST00000376781 231 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 RNU6-452P-201ENST00000384406 107 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 HMGB1P13-201ENST00000406019 642 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 ATF1P1-201ENST00000406040 927 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA13P31271 RNU4-74P-201ENST00000411280 161 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AL139095.3-201ENST00000419672 1203 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms