Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AC092162.1-201ENST00000432828 434 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AC000111.2-201ENST00000448200 210 ntBASIC4.68□□□□□ -1.66
CDH3P22223 HMGB1P5-202ENST00000451497 985 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH3P22223 RPL7AP52-201ENST00000458096 790 ntBASIC4.68□□□□□ -1.66
CDH3P22223 PSMC1P13-201ENST00000458195 985 ntBASIC4.68□□□□□ -1.66
CDH3P22223 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 AC007686.1-201ENST00000488511 463 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC020890.1-201ENST00000491837 504 ntBASIC4.68□□□□□ -1.66
CDH3P22223 CDH12P2-201ENST00000504393 298 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC016550.1-201ENST00000505348 785 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH3P22223 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AL049839.1-201ENST00000556151 657 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 AC025918.2-201ENST00000558683 763 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 SNORA74C-1-201ENST00000580726 201 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AL391358.1-201ENST00000605342 190 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AC010424.2-201ENST00000607594 443 ntBASIC4.68□□□□□ -1.66
CDH3P22223 FAM27B-201ENST00000610601 213 ntBASIC4.68□□□□□ -1.66
CDH3P22223 AP006248.2-201ENST00000623309 592 ntBASIC4.68□□□□□ -1.66
CDH3P22223 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH3P22223 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH3P22223 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH3P22223 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH3P22223 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 AC107068.1-201ENST00000563286 4218 ntBASIC4.68□□□□□ -1.66
CDH3P22223 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH3P22223 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH3P22223 NCLP2-201ENST00000416078 1462 ntBASIC4.68□□□□□ -1.66
CDH3P22223 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
CDH3P22223 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 MTND4P26-201ENST00000415971 1359 ntBASIC4.67□□□□□ -1.66
CDH3P22223 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CDH3P22223 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH3P22223 RN7SKP115-201ENST00000363177 317 ntBASIC4.67□□□□□ -1.66
CDH3P22223 RNU6-252P-201ENST00000363232 107 ntBASIC4.67□□□□□ -1.66
CDH3P22223 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 LAP3P1-201ENST00000403648 294 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AL034374.1-201ENST00000406329 351 ntBASIC4.67□□□□□ -1.66
CDH3P22223 RNU4-27P-201ENST00000410889 139 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 AC004074.1-201ENST00000421810 1063 ntBASIC4.67□□□□□ -1.66
CDH3P22223 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 NRBF2P3-201ENST00000432731 865 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 CACYBPP1-201ENST00000438592 684 ntBASIC4.67□□□□□ -1.66
CDH3P22223 MTCYBP21-201ENST00000443300 1113 ntBASIC4.67□□□□□ -1.66
CDH3P22223 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.67□□□□□ -1.66
CDH3P22223 GYG1P1-201ENST00000460864 698 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AC006967.1-201ENST00000467608 589 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH3P22223 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH3P22223 SNORD116-26-201ENST00000516006 96 ntBASIC4.67□□□□□ -1.66
CDH3P22223 RN7SKP276-201ENST00000516242 268 ntBASIC4.67□□□□□ -1.66
CDH3P22223 RNU6-1308P-201ENST00000516817 103 ntBASIC4.67□□□□□ -1.66
CDH3P22223 Y_RNA.719-201ENST00000517156 106 ntBASIC4.67□□□□□ -1.66
CDH3P22223 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH3P22223 SMARCE1P4-201ENST00000523647 241 ntBASIC4.67□□□□□ -1.66
CDH3P22223 SOX5P1-201ENST00000524155 1127 ntBASIC4.67□□□□□ -1.66
CDH3P22223 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH3P22223 GSTP1P1-201ENST00000548078 319 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AC133555.2-201ENST00000550213 292 ntBASIC4.67□□□□□ -1.66
CDH3P22223 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH3P22223 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH3P22223 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH3P22223 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH3P22223 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 AC007497.1-201ENST00000610421 561 ntBASIC4.67□□□□□ -1.66
CDH3P22223 AL161616.1-201ENST00000611867 286 ntBASIC4.67□□□□□ -1.66
CDH3P22223 MIR8084-201ENST00000614105 89 ntBASIC4.67□□□□□ -1.66
CDH3P22223 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH3P22223 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH3P22223 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms