Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC02495-203ENST00000636704 242 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC138649.5-201ENST00000637456 137 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 AC009779.8-201ENST00000641684 4384 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 CKAP2P1-201ENST00000555477 2049 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.54□□□□□ -1.36
NFKB1P19838 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.54□□□□□ -1.36
NFKB1P19838 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 SNORA75.4-201ENST00000391278 119 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL354719.1-201ENST00000406535 843 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 OR4K12P-201ENST00000406538 961 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NFKB1P19838 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 RN7SKP32-201ENST00000410167 303 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 RN7SKP281-201ENST00000410472 352 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 MRPS21P5-201ENST00000417885 231 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL034379.1-201ENST00000423216 253 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL589872.1-201ENST00000426602 288 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 RPL23AP4-201ENST00000427757 463 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 LSM1P1-201ENST00000438629 273 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC023274.2-201ENST00000445264 521 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 CBWD4P-201ENST00000445695 655 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 RPS27AP15-201ENST00000447672 466 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 BTF3P5-201ENST00000457252 467 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 MTCO1P42-201ENST00000457379 726 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC017015.1-201ENST00000477387 286 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 RPL17P2-201ENST00000491913 451 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC006390.1-201ENST00000508068 283 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 IGKV1D-22-201ENST00000518953 324 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 IGHV1-14-201ENST00000523391 241 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AL133399.1-201ENST00000527476 298 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC244034.2-201ENST00000562504 509 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.54□□□□□ -1.36
NFKB1P19838 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.54□□□□□ -1.36
NFKB1P19838 AL451049.1-201ENST00000608672 497 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 uc_338.5-201ENST00000611839 155 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 AC024255.1-201ENST00000614376 102 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
NFKB1P19838 RMST_7.1-201ENST00000621935 268 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 MIR6503-201ENST00000622884 86 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
NFKB1P19838 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.54□□□□□ -1.36
NFKB1P19838 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 AC022507.1-201ENST00000548349 1505 ntBASIC6.54□□□□□ -1.36
NFKB1P19838 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
NFKB1P19838 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NFKB1P19838 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 MTND5P3-201ENST00000438536 1800 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 MTND5P23-201ENST00000430812 1655 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 RNA5SP350-201ENST00000363298 111 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 RNU6-282P-201ENST00000365357 103 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 RNU1-39P-201ENST00000383897 165 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 MIR1305-201ENST00000408300 86 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 RNU6-373P-201ENST00000411247 98 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms