Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TOP2AP11388 AL359643.1-201ENST00000404109 423 ntBASIC7.02□□□□□ -1.29
TOP2AP11388 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.02□□□□□ -1.29
TOP2AP11388 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
TOP2AP11388 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC7.02□□□□□ -1.29
TOP2AP11388 AL133162.1-201ENST00000463228 453 ntBASIC7.02□□□□□ -1.29
TOP2AP11388 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.02□□□□□ -1.29
TOP2AP11388 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.02□□□□□ -1.29
TOP2AP11388 AC015922.4-201ENST00000612568 690 ntBASIC7.02□□□□□ -1.29
TOP2AP11388 AC007342.8-201ENST00000623278 678 ntBASIC7.02□□□□□ -1.29
TOP2AP11388 AL672167.1-203ENST00000641299 2975 ntBASIC7.02□□□□□ -1.29
TOP2AP11388 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TOP2AP11388 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TOP2AP11388 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 PTMAP5-201ENST00000393073 333 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC233289.1-201ENST00000403700 508 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC7.01□□□□□ -1.29
TOP2AP11388 BX119904.3-201ENST00000428194 957 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.01□□□□□ -1.29
TOP2AP11388 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 SRGNP1-201ENST00000603392 451 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC091953.5-201ENST00000622919 233 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AL034408.1-202ENST00000636088 415 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 LINC00561-201ENST00000565815 2738 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOP2AP11388 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOP2AP11388 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TOP2AP11388 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
TOP2AP11388 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.01□□□□□ -1.29
TOP2AP11388 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOP2AP11388 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TOP2AP11388 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 PGBD4P8-201ENST00000412993 562 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 TCEA1P2-201ENST00000420496 906 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.01□□□□□ -1.29
TOP2AP11388 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 AL451050.1-201ENST00000450126 415 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 FABP3P2-201ENST00000453169 399 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.01□□□□□ -1.29
TOP2AP11388 DUXAP2-201ENST00000519198 589 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC025627.2-201ENST00000576220 160 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 AC138907.10-201ENST00000623708 983 ntBASIC7.01□□□□□ -1.29
TOP2AP11388 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.01□□□□□ -1.29
TOP2AP11388 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TOP2AP11388 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7□□□□□ -1.29
TOP2AP11388 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 MIR199A2-201ENST00000385289 110 ntBASIC7□□□□□ -1.29
TOP2AP11388 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOP2AP11388 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7□□□□□ -1.29
TOP2AP11388 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7□□□□□ -1.29
TOP2AP11388 Z74696.2-201ENST00000436514 498 ntBASIC7□□□□□ -1.29
TOP2AP11388 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7□□□□□ -1.29
TOP2AP11388 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7□□□□□ -1.29
TOP2AP11388 HMGN1P15-201ENST00000513870 295 ntBASIC7□□□□□ -1.29
TOP2AP11388 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7□□□□□ -1.29
TOP2AP11388 AC100770.1-201ENST00000532310 322 ntBASIC7□□□□□ -1.29
TOP2AP11388 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC7□□□□□ -1.29
TOP2AP11388 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7□□□□□ -1.29
TOP2AP11388 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7□□□□□ -1.29
TOP2AP11388 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7□□□□□ -1.29
TOP2AP11388 MAPK10-320ENST00000641462 6696 ntBASIC6.99□□□□□ -1.29
TOP2AP11388 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TOP2AP11388 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TOP2AP11388 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TOP2AP11388 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.99□□□□□ -1.29
TOP2AP11388 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
TOP2AP11388 AC009237.5-201ENST00000414271 501 ntBASIC6.99□□□□□ -1.29
TOP2AP11388 RPL7P49-201ENST00000471402 708 ntBASIC6.99□□□□□ -1.29
TOP2AP11388 IGKV2-23-201ENST00000518729 323 ntBASIC6.99□□□□□ -1.29
TOP2AP11388 RPL23AP87-202ENST00000573039 466 ntBASIC6.99□□□□□ -1.29
TOP2AP11388 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TOP2AP11388 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TOP2AP11388 RPS23P10-201ENST00000416185 486 ntBASIC6.98□□□□□ -1.29
TOP2AP11388 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.98□□□□□ -1.29
TOP2AP11388 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.98□□□□□ -1.29
TOP2AP11388 PPIAP15-201ENST00000479662 484 ntBASIC6.98□□□□□ -1.29
TOP2AP11388 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6.98□□□□□ -1.29
TOP2AP11388 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.98□□□□□ -1.29
TOP2AP11388 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.98□□□□□ -1.29
TOP2AP11388 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.98□□□□□ -1.29
TOP2AP11388 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms