Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-875P-201ENST00000516488 106 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 DEFB108A-201ENST00000530110 222 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC123904.3-201ENST00000547218 814 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC007342.5-201ENST00000571340 2142 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AL390838.2-201ENST00000602394 274 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC068276.1-201ENST00000605793 379 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC012414.7-202ENST00000622705 1090 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 AC017104.4-201ENST00000636283 1592 ntBASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.8□□□□□ -1.16
CSB-PGBD3P0DP91 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 NCOA4P3-201ENST00000513203 1877 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 RAD17P2-201ENST00000451754 1977 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC016583.1-201ENST00000624221 2431 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-621P-201ENST00000364752 109 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 RPS15AP38-201ENST00000413110 372 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC023141.8-201ENST00000442554 208 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 COX6CP18-201ENST00000448769 222 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC103563.5-201ENST00000455643 364 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 RPL32P33-201ENST00000487023 394 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AL035404.1-201ENST00000497982 568 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC098799.3-201ENST00000506095 438 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 HIGD1AP14-201ENST00000507617 282 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC024589.1-201ENST00000512207 263 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-314P-201ENST00000516574 104 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 SMARCE1P4-201ENST00000523647 241 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 CENPUP1-201ENST00000526649 1202 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 GTF2IP8-201ENST00000560687 584 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 MIR7155-201ENST00000615925 56 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 MIR8080-201ENST00000622224 89 ntBASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CSB-PGBD3P0DP91 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL133243.4-201ENST00000623116 3109 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 RNA5SP211-201ENST00000365516 117 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-692P-201ENST00000384496 107 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL356057.2-201ENST00000403318 432 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL050321.1-201ENST00000432363 400 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 PPIAP17-201ENST00000438507 471 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL450996.1-201ENST00000445574 1202 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL022237.1-201ENST00000446663 358 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 PAXBP1P1-201ENST00000449315 447 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 DDX39BP2-208ENST00000453923 258 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms