Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
APOA4P06727 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
APOA4P06727 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
APOA4P06727 SALL4P2-201ENST00000423288 2910 ntBASIC4.86□□□□□ -1.63
APOA4P06727 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.86□□□□□ -1.63
APOA4P06727 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 MIR105-2-201ENST00000385083 81 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AL035419.1-201ENST00000397037 564 ntBASIC4.86□□□□□ -1.63
APOA4P06727 DPPA2P3-201ENST00000411853 655 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 MTCO1P43-201ENST00000431831 488 ntBASIC4.86□□□□□ -1.63
APOA4P06727 RHOT1P3-201ENST00000436571 331 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.86□□□□□ -1.63
APOA4P06727 PRPF38AP2-201ENST00000438179 851 ntBASIC4.86□□□□□ -1.63
APOA4P06727 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.86□□□□□ -1.63
APOA4P06727 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 RPL7AP6-201ENST00000477943 801 ntBASIC4.86□□□□□ -1.63
APOA4P06727 RN7SL97P-201ENST00000486780 299 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AC008638.1-201ENST00000506035 866 ntBASIC4.86□□□□□ -1.63
APOA4P06727 OR5H4P-201ENST00000510851 923 ntBASIC4.86□□□□□ -1.63
APOA4P06727 BUD31P1-201ENST00000521828 359 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.86□□□□□ -1.63
APOA4P06727 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.86□□□□□ -1.63
APOA4P06727 AC090312.2-201ENST00000582687 378 ntBASIC4.86□□□□□ -1.63
APOA4P06727 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.86□□□□□ -1.63
APOA4P06727 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.86□□□□□ -1.63
APOA4P06727 MIR8084-201ENST00000614105 89 ntBASIC4.86□□□□□ -1.63
APOA4P06727 AC091905.4-201ENST00000623432 202 ntBASIC4.86□□□□□ -1.63
APOA4P06727 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 AC104446.1-201ENST00000613728 1321 ntBASIC4.86□□□□□ -1.63
APOA4P06727 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.86□□□□□ -1.63
APOA4P06727 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
APOA4P06727 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
APOA4P06727 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOA4P06727 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.85□□□□□ -1.63
APOA4P06727 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
APOA4P06727 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
APOA4P06727 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
APOA4P06727 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 RPL23AP59-201ENST00000399415 461 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC008173.1-201ENST00000418901 264 ntBASIC4.85□□□□□ -1.63
APOA4P06727 VN1R37P-201ENST00000419096 748 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 RPS27P18-201ENST00000431701 247 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC004938.1-201ENST00000438468 308 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC105402.2-201ENST00000438503 358 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC092809.1-201ENST00000441469 474 ntBASIC4.85□□□□□ -1.63
APOA4P06727 RPL6P5-201ENST00000445678 828 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC104689.1-201ENST00000473356 768 ntBASIC4.85□□□□□ -1.63
APOA4P06727 SETP6-201ENST00000479329 568 ntBASIC4.85□□□□□ -1.63
APOA4P06727 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 HMGB1P21-201ENST00000502313 581 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.85□□□□□ -1.63
APOA4P06727 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
APOA4P06727 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AP000916.1-201ENST00000533869 835 ntBASIC4.85□□□□□ -1.63
APOA4P06727 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 SNORA74C-1-201ENST00000580726 201 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.85□□□□□ -1.63
APOA4P06727 AL392112.1-201ENST00000605115 829 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC006213.5-201ENST00000619673 288 ntBASIC4.85□□□□□ -1.63
APOA4P06727 AC095038.2-201ENST00000621464 1070 ntBASIC4.85□□□□□ -1.63
APOA4P06727 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
APOA4P06727 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
APOA4P06727 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOA4P06727 MAPK10-263ENST00000641052 4307 ntBASIC4.85□□□□□ -1.63
APOA4P06727 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
APOA4P06727 AC009951.1-201ENST00000623674 2614 ntBASIC4.84□□□□□ -1.63
APOA4P06727 AC099654.2-201ENST00000433031 1980 ntBASIC4.84□□□□□ -1.63
APOA4P06727 MTCO1P4-201ENST00000520516 1409 ntBASIC4.84□□□□□ -1.63
APOA4P06727 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOA4P06727 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms