Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC104629.2-201ENST00000468627 598 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 AC007537.2-201ENST00000472093 511 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA1P02708 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA1P02708 RN7SKP46-201ENST00000515942 234 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 RNA5SP497-201ENST00000516081 97 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 RNA5SP49-201ENST00000516450 115 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 HMGB1P19-201ENST00000517578 577 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA1P02708 DYNLL1P4-201ENST00000549314 266 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA1P02708 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA1P02708 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 RMST_5.1-201ENST00000618704 126 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AL133370.2-201ENST00000619934 439 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 MIR8059-201ENST00000620427 81 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AC090506.2-201ENST00000624521 419 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AC022893.2-201ENST00000564832 3296 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA1P02708 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA1P02708 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA1P02708 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CHRNA1P02708 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA1P02708 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA1P02708 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA1P02708 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 MTCO1P8-201ENST00000416914 1523 ntBASIC4.82□□□□□ -1.64
CHRNA1P02708 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 RNU1-94P-201ENST00000362627 173 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 RNU6-618P-201ENST00000363518 112 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 SNORD65-201ENST00000391079 73 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA1P02708 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 EEF1A1P1-201ENST00000447052 739 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 RPL35P6-201ENST00000490024 372 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 PGBD4P4-201ENST00000509673 613 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 AC093227.2-201ENST00000589357 285 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 AC245389.2-201ENST00000616023 576 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 AC242843.1-201ENST00000618702 573 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA1P02708 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA1P02708 NXPH1-205ENST00000602349 1953 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA1P02708 AC090971.4-201ENST00000560291 1800 ntBASIC4.81□□□□□ -1.64
CHRNA1P02708 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA1P02708 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA1P02708 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA1P02708 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA1P02708 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 MAPK10-304ENST00000641341 3984 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRNA1P02708 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 RNU1-64P-201ENST00000365443 163 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 FCF1P5-201ENST00000406490 482 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 COX6CP15-201ENST00000426313 211 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 YY1P1-201ENST00000427625 668 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 Z85994.2-201ENST00000434327 452 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 HSFY6P-201ENST00000445573 403 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AL359073.1-201ENST00000448036 403 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 ATP1B1P1-201ENST00000509767 915 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 OR7E10P-201ENST00000526420 991 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 OR5BC1P-201ENST00000529327 739 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA1P02708 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA1P02708 OR8R1P-201ENST00000543943 764 ntBASIC4.8□□□□□ -1.64
CHRNA1P02708 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms