Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.8□□□□□ -2.12
USH2AO75445 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 MIR7853-201ENST00000584820 132 ntBASIC1.8□□□□□ -2.12
USH2AO75445 MIR6868-201ENST00000611215 58 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AL590240.3-201ENST00000621416 943 ntBASIC1.8□□□□□ -2.12
USH2AO75445 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC1.8□□□□□ -2.12
USH2AO75445 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USH2AO75445 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 ATP5HP2-201ENST00000433885 485 ntBASIC1.8□□□□□ -2.12
USH2AO75445 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 YWHABP1-201ENST00000445359 727 ntBASIC1.8□□□□□ -2.12
USH2AO75445 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
USH2AO75445 AC113192.3-201ENST00000529152 742 ntBASIC1.8□□□□□ -2.12
USH2AO75445 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 GMCL1P2-201ENST00000605230 823 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AL049781.1-201ENST00000623195 3585 ntBASIC1.8□□□□□ -2.12
USH2AO75445 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 NAMPTP1-201ENST00000440465 2514 ntBASIC1.8□□□□□ -2.12
USH2AO75445 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 HNRNPA1P54-201ENST00000411857 9714 ntBASIC1.8□□□□□ -2.12
USH2AO75445 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC1.8□□□□□ -2.12
USH2AO75445 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USH2AO75445 SOD2P1-201ENST00000396543 562 ntBASIC1.8□□□□□ -2.12
USH2AO75445 HNRNPA1P29-201ENST00000426409 879 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AC104058.1-201ENST00000448028 297 ntBASIC1.8□□□□□ -2.12
USH2AO75445 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.8□□□□□ -2.12
USH2AO75445 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 CDY3P-201ENST00000454543 1618 ntBASIC1.8□□□□□ -2.12
USH2AO75445 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 ESD-201ENST00000378697 1079 ntTSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.8□□□□□ -2.12
USH2AO75445 SERPINA7P1-201ENST00000443077 631 ntBASIC1.8□□□□□ -2.12
USH2AO75445 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC1.8□□□□□ -2.12
USH2AO75445 RANP9-201ENST00000519957 271 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC1.8□□□□□ -2.12
USH2AO75445 MIR3162-201ENST00000581818 82 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AC015726.1-201ENST00000602353 681 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AC103881.1-201ENST00000603476 538 ntBASIC1.8□□□□□ -2.12
USH2AO75445 AC008833.1-201ENST00000611633 691 ntBASIC1.8□□□□□ -2.12
USH2AO75445 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH2AO75445 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
USH2AO75445 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USH2AO75445 AC109446.4-201ENST00000623235 2755 ntBASIC1.79□□□□□ -2.12
USH2AO75445 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
USH2AO75445 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 AC017079.2-201ENST00000416102 485 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AL009174.1-201ENST00000426577 416 ntBASIC1.79□□□□□ -2.12
USH2AO75445 MTND2P40-201ENST00000436718 841 ntBASIC1.79□□□□□ -2.12
USH2AO75445 RPL35AP21-201ENST00000437667 333 ntBASIC1.79□□□□□ -2.12
USH2AO75445 SNORA71B-202ENST00000439232 272 ntBASIC1.79□□□□□ -2.12
USH2AO75445 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 YWHAEP4-201ENST00000505390 198 ntBASIC1.79□□□□□ -2.12
USH2AO75445 PHBP14-201ENST00000512887 367 ntBASIC1.79□□□□□ -2.12
USH2AO75445 RPL23AP53-201ENST00000521854 457 ntBASIC1.79□□□□□ -2.12
USH2AO75445 RERGL-202ENST00000536890 367 ntTSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 CYCSP30-201ENST00000546447 172 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AC020914.6-201ENST00000594327 272 ntBASIC1.79□□□□□ -2.12
USH2AO75445 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 ZNF807-201ENST00000328088 1707 ntBASIC1.79□□□□□ -2.12
USH2AO75445 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms