Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BRD9P1-201ENST00000529855 560 ntBASIC4.85□□□□□ -1.63
LDB2O43679 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.85□□□□□ -1.63
LDB2O43679 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 BNIP3P1-201ENST00000547295 580 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 PCNPP1-201ENST00000552501 511 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 CCDC58P3-201ENST00000590792 430 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC011487.3-201ENST00000593607 453 ntBASIC4.85□□□□□ -1.63
LDB2O43679 DUXAP3-201ENST00000603616 594 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC011374.2-201ENST00000607135 526 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AP004607.9-201ENST00000618202 316 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC139713.2-210ENST00000641741 992 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC017007.4-201ENST00000503353 1352 ntBASIC4.85□□□□□ -1.63
LDB2O43679 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 AC025574.1-201ENST00000554784 1653 ntBASIC4.85□□□□□ -1.63
LDB2O43679 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
LDB2O43679 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.84□□□□□ -1.63
LDB2O43679 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 TTC39DP-201ENST00000416781 1688 ntBASIC4.84□□□□□ -1.63
LDB2O43679 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 CASC19-206ENST00000641028 1430 ntBASIC4.84□□□□□ -1.63
LDB2O43679 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 RN7SKP115-201ENST00000363177 317 ntBASIC4.84□□□□□ -1.63
LDB2O43679 RNU4-31P-201ENST00000384211 141 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.84□□□□□ -1.63
LDB2O43679 LINC01347-201ENST00000417964 355 ntBASIC4.84□□□□□ -1.63
LDB2O43679 OR2AM1P-201ENST00000422137 422 ntBASIC4.84□□□□□ -1.63
LDB2O43679 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 RPS17P8-201ENST00000434525 335 ntBASIC4.84□□□□□ -1.63
LDB2O43679 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 PRPF38AP2-201ENST00000438179 851 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC073648.4-201ENST00000442655 781 ntBASIC4.84□□□□□ -1.63
LDB2O43679 HSFY3P-201ENST00000444242 1191 ntBASIC4.84□□□□□ -1.63
LDB2O43679 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 SLC25A18P1-201ENST00000449385 454 ntBASIC4.84□□□□□ -1.63
LDB2O43679 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 RBMY2TP-201ENST00000451162 947 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDB2O43679 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 CDH12P2-201ENST00000504393 298 ntBASIC4.84□□□□□ -1.63
LDB2O43679 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.84□□□□□ -1.63
LDB2O43679 AC087897.1-201ENST00000550134 156 ntBASIC4.84□□□□□ -1.63
LDB2O43679 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.84□□□□□ -1.63
LDB2O43679 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.84□□□□□ -1.63
LDB2O43679 AC009852.2-201ENST00000567898 485 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.84□□□□□ -1.63
LDB2O43679 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.84□□□□□ -1.63
LDB2O43679 FAM25E-202ENST00000608562 189 ntBASIC4.84□□□□□ -1.63
LDB2O43679 MIR6748-201ENST00000610433 71 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC021755.4-201ENST00000616620 456 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC012414.7-202ENST00000622705 1090 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC091953.3-201ENST00000623220 236 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC024023.1-201ENST00000624530 922 ntBASIC4.84□□□□□ -1.63
LDB2O43679 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.84□□□□□ -1.63
LDB2O43679 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
LDB2O43679 TLK1P1-201ENST00000456760 2440 ntBASIC4.84□□□□□ -1.64
LDB2O43679 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LDB2O43679 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDB2O43679 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDB2O43679 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LDB2O43679 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LDB2O43679 IRF5P1-201ENST00000504852 2164 ntBASIC4.84□□□□□ -1.64
LDB2O43679 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDB2O43679 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.84□□□□□ -1.64
LDB2O43679 OR9K1P-202ENST00000641111 3217 ntBASIC4.84□□□□□ -1.64
LDB2O43679 STX3-208ENST00000641815 3236 ntBASIC4.84□□□□□ -1.64
LDB2O43679 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 AC019072.1-201ENST00000604535 1551 ntBASIC4.83□□□□□ -1.64
LDB2O43679 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms