Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC104306.1-201ENST00000449702 371 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 FGF7P3-201ENST00000454645 303 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC096741.1-201ENST00000472250 846 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 OR52A4P-203ENST00000498233 1014 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 DUX4L52-201ENST00000549363 777 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL137072.1-201ENST00000603444 466 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 IQCB2P-201ENST00000401788 1633 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC092162.3-201ENST00000624511 1624 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 THAP12P8-201ENST00000447914 2115 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 MARK2P15-201ENST00000432204 2186 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 VPS35P1-201ENST00000563400 1518 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 OR4K15-201ENST00000305051 1216 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AL672167.2-201ENST00000377164 879 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 RNA5SP332-201ENST00000391063 115 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AL035419.1-201ENST00000397037 564 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 RPL23AP59-201ENST00000399415 461 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 MFSD13B-201ENST00000420133 1290 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 MTND2P11-201ENST00000423638 648 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 MTCO1P54-201ENST00000430139 712 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 OR52A4P-201ENST00000472867 958 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 RPS27AP16-201ENST00000492222 470 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AGGF1P3-201ENST00000493675 1213 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 RNA5SP73-201ENST00000516744 108 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AL121873.1-201ENST00000616013 524 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC103858.2-201ENST00000621471 543 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 AC140479.6-201ENST00000633535 357 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 CFTRP2-201ENST00000634304 199 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 DHX40P1-201ENST00000588725 1412 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 OR56B2P-202ENST00000641377 2453 ntBASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM49D1C9J1S8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 RNA5SP36-201ENST00000410197 133 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 CASKP1-201ENST00000412870 582 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 PGBD4P8-201ENST00000412993 562 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 MTCYBP14-201ENST00000457471 715 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 SYT14P1-201ENST00000481459 721 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 RN7SKP34-201ENST00000516142 244 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 CD24P2-201ENST00000565486 219 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AC096553.1-201ENST00000605169 829 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 BX322635.1-201ENST00000605804 496 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 SNORA35B-201ENST00000607417 129 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AC016911.1-201ENST00000613297 452 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AL158062.1-201ENST00000619632 745 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 RMST_9.1-201ENST00000619945 193 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AC015722.2-201ENST00000622210 551 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 AC090017.1-201ENST00000548612 1779 ntBASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM49D1C9J1S8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM49D1C9J1S8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms