Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 7SK.10-201ENST00000621414 298 ntBASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 AL138693.1-201ENST00000622219 129 ntBASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 AC120057.5-201ENST00000623840 154 ntBASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 CDRT1-208ENST00000630868 794 ntBASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
NEUROD4Q9HD90 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
NEUROD4Q9HD90 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
NEUROD4Q9HD90 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
NEUROD4Q9HD90 CLCA3P-203ENST00000490028 2781 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC110597.1-201ENST00000562669 3176 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC102941.1-201ENST00000567616 1537 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 GAPDHP42-201ENST00000406848 981 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RNU2-8P-201ENST00000410727 190 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RNU2-62P-201ENST00000410868 191 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC019097.1-201ENST00000424783 735 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RPS3AP54-201ENST00000435535 734 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AL627308.1-201ENST00000435693 821 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RPS3AP38-201ENST00000435889 763 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AL356133.1-201ENST00000444762 372 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 HIGD1AP8-201ENST00000453927 274 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 Y_RNA.631-201ENST00000459607 101 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MTND4P17-201ENST00000470444 350 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC027575.1-201ENST00000481064 460 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC233702.1-201ENST00000482905 502 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RN7SL267P-201ENST00000485107 261 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC090096.1-201ENST00000489168 390 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 UBA52P3-201ENST00000491303 382 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RPL23AP80-201ENST00000495605 424 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RPSAP51-201ENST00000497462 645 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC123904.2-201ENST00000548059 300 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC005668.1-201ENST00000571142 476 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MIR3118-1-201ENST00000581787 76 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC078899.5-201ENST00000612475 178 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AL034546.1-201ENST00000623740 3693 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC022031.1-201ENST00000585985 2593 ntBASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEUROD4Q9HD90 MAPK10-357ENST00000641831 2858 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 RBPJP6-201ENST00000411556 1431 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 AC125232.1-201ENST00000452554 1408 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 RIOK3P1-201ENST00000418778 1528 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 CDY19P-201ENST00000411668 1613 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 CDY18P-201ENST00000438294 1609 ntBASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEUROD4Q9HD90 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms