Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MRPL42P4-201ENST00000453267 443 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 SRRM1P2-201ENST00000464531 1192 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 BZW1P2-201ENST00000473537 826 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 RPS18P6-201ENST00000476880 458 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 RPSAP50-201ENST00000481955 852 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 ACTR3BP3-201ENST00000565577 979 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 VN1R88P-201ENST00000596787 292 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 BNIP3P30-201ENST00000601184 574 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC006363.1-201ENST00000603806 463 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 DUXAP11-201ENST00000603858 526 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AL163642.2-201ENST00000604722 1019 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AL445222.1-201ENST00000607259 628 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC018755.4-201ENST00000619715 454 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AP002505.2-201ENST00000623585 696 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC092656.1-203ENST00000624134 423 ntBASIC6.33□□□□□ -1.4
DDX11Q96FC9 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
DDX11Q96FC9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DDX11Q96FC9 AC079298.1-201ENST00000625026 1619 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AL078621.3-201ENST00000623707 2042 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 OR5H15-201ENST00000383696 930 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 RNU6-1263P-201ENST00000384601 106 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC124944.2-201ENST00000429866 1242 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC005189.1-201ENST00000431286 310 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 ARAFP2-201ENST00000440565 559 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 GTF2IP12-201ENST00000456547 356 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 SYPL1P1-201ENST00000473622 768 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 RN7SL222P-201ENST00000476452 299 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 RN7SL808P-201ENST00000496066 299 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC010460.1-201ENST00000507087 466 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC108475.1-201ENST00000507880 950 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 MTND6P2-201ENST00000512226 524 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC092709.1-201ENST00000521355 1045 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AP004607.2-201ENST00000533949 322 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC022662.1-201ENST00000580252 331 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC090616.2-202ENST00000584248 222 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC008759.1-201ENST00000589783 983 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 VN1R90P-201ENST00000595717 726 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AL357078.3-201ENST00000607528 618 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC126915.2-201ENST00000610957 190 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC122133.1-201ENST00000613964 233 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 AC099654.6-201ENST00000636487 512 ntBASIC6.32□□□□□ -1.4
DDX11Q96FC9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DDX11Q96FC9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX11Q96FC9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 ZNF733P-202ENST00000444809 1573 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC107021.2-201ENST00000567714 2095 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms