Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.24□□□□□ -1.57
RTL9Q8NET4 AL358232.1-201ENST00000448030 501 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC091959.2-201ENST00000477363 321 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 BNIP3P41-201ENST00000503774 571 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.24□□□□□ -1.57
RTL9Q8NET4 RNU4-89P-201ENST00000607443 133 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RTL9Q8NET4 AL672167.1-203ENST00000641299 2975 ntBASIC5.24□□□□□ -1.57
RTL9Q8NET4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTL9Q8NET4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 RN7SKP159-201ENST00000410657 292 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 TPT1P2-201ENST00000413105 503 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 ABCF2P2-201ENST00000450549 296 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 AC079804.1-201ENST00000461922 436 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 AC010300.1-201ENST00000600671 5134 ntBASIC5.23□□□□□ -1.57
RTL9Q8NET4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.23□□□□□ -1.57
RTL9Q8NET4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTL9Q8NET4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 SNORA62.3-201ENST00000365110 153 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 RNA5SP22-201ENST00000365393 109 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 MIR1179-201ENST00000408703 91 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 VN1R34P-201ENST00000447387 883 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 SEPT7P3-201ENST00000455017 621 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC146944.2-203ENST00000502493 354 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 NPM1P41-201ENST00000512920 831 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC139495.1-202ENST00000513164 354 ntBASIC5.22□□□□□ -1.57
RTL9Q8NET4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTL9Q8NET4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RTL9Q8NET4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTL9Q8NET4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTL9Q8NET4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.21□□□□□ -1.57
RTL9Q8NET4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTL9Q8NET4 RNU11-4P-201ENST00000391149 133 ntBASIC5.21□□□□□ -1.58
RTL9Q8NET4 SNORD66.1-201ENST00000391230 76 ntBASIC5.21□□□□□ -1.58
RTL9Q8NET4 AC108032.1-201ENST00000416706 207 ntBASIC5.21□□□□□ -1.58
RTL9Q8NET4 AC115285.1-201ENST00000424879 736 ntBASIC5.21□□□□□ -1.58
RTL9Q8NET4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTL9Q8NET4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 AP005901.4-201ENST00000577336 569 ntBASIC5.21□□□□□ -1.58
RTL9Q8NET4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTL9Q8NET4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTL9Q8NET4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.21□□□□□ -1.58
RTL9Q8NET4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL9Q8NET4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL9Q8NET4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 RPL7P2-201ENST00000427639 268 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 AL445584.1-201ENST00000431451 330 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 RPL23AP46-201ENST00000438548 490 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 ARAFP2-201ENST00000440565 559 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 RPS27AP15-201ENST00000447672 466 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 SUMO2P4-201ENST00000504193 276 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL9Q8NET4 AC019278.1-201ENST00000623516 479 ntBASIC5.2□□□□□ -1.58
RTL9Q8NET4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL9Q8NET4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms