Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 OR1L1-202ENST00000373686 1083 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL390316.1-201ENST00000406279 553 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 RRM2P4-201ENST00000441721 562 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC004865.1-201ENST00000442276 1003 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 PRDX3P4-201ENST00000470828 747 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC004453.1-201ENST00000487895 408 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AF279873.1-201ENST00000523393 313 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC068993.1-201ENST00000546724 589 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC068446.3-201ENST00000555285 382 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 RPP40P2-201ENST00000603596 712 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AL583856.2-201ENST00000606298 543 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AP004247.3-201ENST00000608682 624 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 CASC19-222ENST00000641321 1173 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 CASC19-221ENST00000641309 1382 ntBASIC5.04□□□□□ -1.6
LRRTM4Q86VH4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 XPOTP1-201ENST00000443317 2398 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RNU4-4P-201ENST00000364588 130 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RNU6-1151P-201ENST00000384684 107 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC027644.1-201ENST00000419595 298 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR6C64P-201ENST00000419708 825 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RPL23AP15-201ENST00000450202 459 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 NPM1P13-201ENST00000452663 865 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC091180.1-201ENST00000462104 372 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RN7SL329P-201ENST00000467740 299 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 HMGN2P25-201ENST00000486956 268 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RPL32P9-201ENST00000487963 407 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 HIGD1AP6-201ENST00000521833 279 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR10V3P-201ENST00000525712 725 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms