Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AP000769.2-201ENST00000602344 396 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC023762.1-201ENST00000603280 584 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC087783.2-201ENST00000605070 562 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC024023.1-201ENST00000624530 922 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AL132640.2-201ENST00000559968 1698 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC006210.2-201ENST00000367074 1545 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 GTF2H2B-203ENST00000508065 1432 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 SNORA62.2-201ENST00000364672 152 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 VTA1P1-201ENST00000414044 866 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC246680.2-201ENST00000422106 389 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 PTP4A1P7-201ENST00000423476 514 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 FTH1P16-201ENST00000435241 552 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL389915.2-201ENST00000454576 441 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 NDUFA12P1-201ENST00000455914 406 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC008427.1-201ENST00000503102 655 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MTND6P2-201ENST00000512226 524 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 SNORD116-26-201ENST00000516006 96 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC090819.1-201ENST00000523800 1111 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC011611.5-201ENST00000552477 578 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL049830.4-201ENST00000555149 351 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MIR4472-2-201ENST00000582069 67 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC055764.2-201ENST00000610089 670 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC007342.8-201ENST00000623278 678 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 AC106754.1-201ENST00000562632 1513 ntBASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM3Q53GG5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 SCN1A-220ENST00000641603 12506 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC017007.4-201ENST00000503353 1352 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC022893.2-201ENST00000564832 3296 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RNU4-4P-201ENST00000364588 130 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RNVU1-6-201ENST00000364688 164 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC234772.1-201ENST00000377927 937 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RNU6-298P-201ENST00000390888 96 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RPL17P50-201ENST00000396131 546 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 P2RY10P2-201ENST00000416730 913 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 MTCO2P23-201ENST00000425216 680 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 ETF1P3-201ENST00000430422 1160 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 NPM1P33-201ENST00000438918 872 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 RPL7P33-201ENST00000444159 742 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC012512.1-201ENST00000446594 718 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC092685.1-201ENST00000447960 1243 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC092754.1-201ENST00000472975 479 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 GTF2IP9-201ENST00000502460 301 ntBASIC4.3□□□□□ -1.72
PDLIM3Q53GG5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms