Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RN7SL52P-201ENST00000584271 284 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC061975.8-201ENST00000587058 721 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC011487.3-201ENST00000593607 453 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 VN1R83P-201ENST00000595685 445 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC015726.1-201ENST00000602353 681 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 BNIP3P4-201ENST00000604946 565 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC093799.2-201ENST00000610062 578 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC055764.2-201ENST00000610089 670 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC024257.5-201ENST00000612739 531 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RN7SL722P-201ENST00000617780 284 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RN7SL565P-201ENST00000618246 284 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 LINC02211-204ENST00000642024 1070 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC021242.1-201ENST00000507315 2035 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AL137100.1-201ENST00000556703 1620 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC005261.4-201ENST00000600047 1385 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 RLIMP2-201ENST00000427891 1563 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 THAP12P4-201ENST00000528321 2266 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 IGKV7-3-201ENST00000357453 298 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 RN7SKP145-201ENST00000363291 303 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC092745.2-202ENST00000411880 369 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 RPS6P15-201ENST00000431996 751 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC234064.1-201ENST00000436312 247 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AL035551.1-201ENST00000446931 348 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC091959.2-201ENST00000477363 321 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 ATP5LP5-201ENST00000483050 299 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC093267.1-201ENST00000489176 961 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC109464.1-201ENST00000511091 819 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC118465.1-201ENST00000513820 1271 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 Y_RNA.688-201ENST00000516565 95 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AP002812.4-201ENST00000532139 286 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 BNIP3P1-201ENST00000547295 580 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC005252.1-201ENST00000604518 1063 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC009597.2-201ENST00000604659 592 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC007349.4-201ENST00000608114 532 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AL445423.1-201ENST00000609941 536 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC139769.3-201ENST00000618383 175 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 ZNF663P-202ENST00000641770 1131 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 AC100871.1-201ENST00000507871 1456 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.5□□□□□ -1.53
SLC44A4Q53GD3 VPS35P1-201ENST00000563400 1518 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 RNU6-549P-201ENST00000384433 107 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 MIR600-201ENST00000385007 98 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC013442.1-201ENST00000397347 228 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 HSPA8P15-201ENST00000401676 786 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms