Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 VPS35P1-201ENST00000563400 1518 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 LARP1BP1-201ENST00000506036 1359 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 CASC19-255ENST00000641733 1385 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 OR5T3-201ENST00000303059 1023 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 IL6STP1-201ENST00000346911 1020 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 RNU1-14P-201ENST00000362759 152 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC083799.1-201ENST00000366451 910 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 RPL32P23-201ENST00000397237 405 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 COX6CP15-201ENST00000426313 211 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 TCP11X3P-202ENST00000514289 1254 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AL161729.3-201ENST00000603533 673 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC005014.3-201ENST00000605985 190 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC090948.2-201ENST00000607363 564 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AL391597.1-201ENST00000618707 694 ntBASIC5.88□□□□□ -1.47
CGNL1Q0VF96 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CGNL1Q0VF96 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RNA5SP296-201ENST00000410523 111 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RN7SKP235-201ENST00000410662 305 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RPL6P29-201ENST00000414863 865 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RPL36AP36-201ENST00000418616 301 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 AC005008.1-201ENST00000456151 612 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RNA5SP519-201ENST00000516480 119 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 HMGB1P23-201ENST00000518743 568 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 AC025857.1-201ENST00000525252 377 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 AC067805.1-201ENST00000559344 470 ntBASIC5.87□□□□□ -1.47
CGNL1Q0VF96 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.87□□□□□ -1.47
CGNL1Q0VF96 SAMMSON-213ENST00000641336 1521 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 RNA5SP36-201ENST00000410197 133 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 USP9YP19-201ENST00000412165 485 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AC009237.10-201ENST00000414112 510 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 UBTFL3-201ENST00000418934 1024 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 RPL23AP38-201ENST00000423801 469 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 UBTFL6-201ENST00000477929 1024 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 RNA5SP73-201ENST00000516744 108 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 SLC25A36P1-201ENST00000590111 465 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 BNIP3P33-201ENST00000598912 569 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AC073592.7-201ENST00000623659 507 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 AC092435.4-201ENST00000623012 4159 ntBASIC5.86□□□□□ -1.47
CGNL1Q0VF96 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.86□□□□□ -1.47
CGNL1Q0VF96 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 AC105074.1-201ENST00000623380 3095 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 RNU6-249P-201ENST00000363016 102 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 AC025750.1-201ENST00000399891 379 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 MIR1911-201ENST00000410783 80 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 EIF4A1P3-201ENST00000411521 244 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 EIF1P3-201ENST00000423841 334 ntBASIC5.85□□□□□ -1.47
CGNL1Q0VF96 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.85□□□□□ -1.47
CGNL1Q0VF96 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms