Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP151-201ENST00000365632 117 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 GLULP6-201ENST00000399502 913 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 OR1F12-201ENST00000402365 945 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 RN7SKP56-201ENST00000410513 331 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC104837.2-201ENST00000427236 424 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 RPL7P4-203ENST00000430239 730 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC008072.1-201ENST00000434254 824 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 ELOCP10-201ENST00000440624 327 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 RPL23AP93-201ENST00000440847 484 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 RPS3AP53-201ENST00000454716 778 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 PPIAP21-201ENST00000464473 501 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC068305.1-201ENST00000497406 726 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 BRD9P1-201ENST00000529855 560 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 ELOCP34-201ENST00000604436 327 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC133644.2-201ENST00000608142 540 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 AC211433.2-201ENST00000608433 387 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 MIR7155-201ENST00000615925 56 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 MTCO1P14-201ENST00000441695 1559 ntBASIC3.38□□□□□ -1.87
HIST1H1AQ02539 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC010928.1-201ENST00000592477 1447 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 RNA5SP307-201ENST00000362863 116 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 MIR105-2-201ENST00000385083 81 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 SDHCP2-201ENST00000398565 501 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 RN7SKP177-201ENST00000410567 355 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 FTH1P6-201ENST00000430768 320 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 PA2G4P6-201ENST00000438325 1197 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 DDX39BP2-208ENST00000453923 258 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 METTL15P1-201ENST00000481421 1045 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC105129.1-201ENST00000560250 297 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AGGF1P8-201ENST00000562979 1000 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 UBE2FP2-201ENST00000566646 462 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC244505.7-201ENST00000599675 272 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 BPIFA4P-203ENST00000603168 689 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC010201.1-201ENST00000605051 540 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AL445528.2-201ENST00000620582 470 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 FAM35DP-201ENST00000323387 2712 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 Z82217.1-201ENST00000625157 8149 ntBASIC3.37□□□□□ -1.87
HIST1H1AQ02539 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HIST1H1AQ02539 AC009313.2-201ENST00000417893 1941 ntBASIC3.36□□□□□ -1.87
HIST1H1AQ02539 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
HIST1H1AQ02539 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms