Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 AC114786.1-201ENST00000512892 1415 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.79□□□□□ -1.48
YBX1P67809 AC016583.1-201ENST00000624221 2431 ntBASIC5.79□□□□□ -1.48
YBX1P67809 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 AF287957.1-201ENST00000607368 1595 ntBASIC5.79□□□□□ -1.48
YBX1P67809 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
YBX1P67809 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 HMGB1P5-201ENST00000255320 642 ntBASIC5.78□□□□□ -1.48
YBX1P67809 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
YBX1P67809 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
YBX1P67809 RN7SKP275-201ENST00000364626 301 ntBASIC5.78□□□□□ -1.48
YBX1P67809 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
YBX1P67809 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.78□□□□□ -1.48
YBX1P67809 RNU2-42P-201ENST00000410697 113 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 NMD3P2-201ENST00000421815 761 ntBASIC5.78□□□□□ -1.48
YBX1P67809 RPS12P17-201ENST00000438591 377 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
YBX1P67809 RN7SL352P-201ENST00000466002 277 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
YBX1P67809 RN7SL193P-201ENST00000491708 276 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.78□□□□□ -1.48
YBX1P67809 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.78□□□□□ -1.48
YBX1P67809 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
YBX1P67809 AC008802.1-201ENST00000519121 791 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.78□□□□□ -1.48
YBX1P67809 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 AC025260.1-201ENST00000548858 430 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC068305.2-201ENST00000550567 1205 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AL049779.3-201ENST00000557141 606 ntBASIC5.78□□□□□ -1.48
YBX1P67809 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AL390838.2-201ENST00000602394 274 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 AC005084.1-201ENST00000605160 304 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AL136097.3-201ENST00000611097 505 ntBASIC5.78□□□□□ -1.48
YBX1P67809 PART1_1.1-201ENST00000611761 217 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC009159.1-201ENST00000618386 642 ntBASIC5.78□□□□□ -1.48
YBX1P67809 AC000095.2-202ENST00000637415 154 ntBASIC5.78□□□□□ -1.48
YBX1P67809 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.78□□□□□ -1.48
YBX1P67809 AC024614.3-201ENST00000637860 256 ntBASIC5.78□□□□□ -1.48
YBX1P67809 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
YBX1P67809 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 MTND5P23-201ENST00000430812 1655 ntBASIC5.78□□□□□ -1.48
YBX1P67809 NSRP1P1-201ENST00000444067 1693 ntBASIC5.78□□□□□ -1.48
YBX1P67809 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
YBX1P67809 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
YBX1P67809 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
YBX1P67809 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.77□□□□□ -1.48
YBX1P67809 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.77□□□□□ -1.49
YBX1P67809 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.77□□□□□ -1.49
YBX1P67809 AC140134.1-201ENST00000511830 3544 ntBASIC5.77□□□□□ -1.49
YBX1P67809 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
YBX1P67809 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
YBX1P67809 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.77□□□□□ -1.49
YBX1P67809 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.77□□□□□ -1.49
YBX1P67809 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.77□□□□□ -1.49
YBX1P67809 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
YBX1P67809 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 RPL21P132-201ENST00000331267 462 ntBASIC5.77□□□□□ -1.49
YBX1P67809 RNA5SP477-201ENST00000362639 119 ntBASIC5.77□□□□□ -1.49
YBX1P67809 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
YBX1P67809 RN7SKP59-201ENST00000410520 314 ntBASIC5.77□□□□□ -1.49
YBX1P67809 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.77□□□□□ -1.49
YBX1P67809 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.77□□□□□ -1.49
YBX1P67809 AC093698.1-201ENST00000423843 571 ntBASIC5.77□□□□□ -1.49
YBX1P67809 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.77□□□□□ -1.49
YBX1P67809 HSPE1P16-201ENST00000426640 348 ntBASIC5.77□□□□□ -1.49
YBX1P67809 BRWD1P3-201ENST00000428816 390 ntBASIC5.77□□□□□ -1.49
YBX1P67809 RPS29P14-201ENST00000431518 171 ntBASIC5.77□□□□□ -1.49
YBX1P67809 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.77□□□□□ -1.49
YBX1P67809 CLUHP1-201ENST00000435012 1190 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms