Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC008782.1-201ENST00000603386 430 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC090953.1-201ENST00000604305 1092 ntBASIC4.95□□□□□ -1.62
VCPP55072 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC117490.2-201ENST00000610042 594 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC100847.1-201ENST00000611316 481 ntBASIC4.95□□□□□ -1.62
VCPP55072 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 RNA5SP196-201ENST00000625967 102 ntBASIC4.95□□□□□ -1.62
VCPP55072 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VCPP55072 TLK1P1-201ENST00000456760 2440 ntBASIC4.94□□□□□ -1.62
VCPP55072 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VCPP55072 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VCPP55072 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.94□□□□□ -1.62
VCPP55072 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VCPP55072 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VCPP55072 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VCPP55072 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.94□□□□□ -1.62
VCPP55072 LINC00993-201ENST00000420453 540 ntBASIC4.94□□□□□ -1.62
VCPP55072 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VCPP55072 YY1P1-201ENST00000427625 668 ntBASIC4.94□□□□□ -1.62
VCPP55072 RPL23AP4-201ENST00000427757 463 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.94□□□□□ -1.62
VCPP55072 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.94□□□□□ -1.62
VCPP55072 RPS5P7-201ENST00000456664 608 ntBASIC4.94□□□□□ -1.62
VCPP55072 RN7SL542P-201ENST00000467147 294 ntBASIC4.94□□□□□ -1.62
VCPP55072 OR8G5-201ENST00000524943 1041 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.94□□□□□ -1.62
VCPP55072 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.94□□□□□ -1.62
VCPP55072 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.94□□□□□ -1.62
VCPP55072 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.94□□□□□ -1.62
VCPP55072 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.94□□□□□ -1.62
VCPP55072 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.94□□□□□ -1.62
VCPP55072 MIR5699-201ENST00000578903 90 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC069061.3-201ENST00000582254 823 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.94□□□□□ -1.62
VCPP55072 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.94□□□□□ -1.62
VCPP55072 BNIP3P19-201ENST00000605397 577 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL353600.1-201ENST00000608148 251 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC114781.5-201ENST00000615297 108 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC234782.5-201ENST00000617723 324 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL035461.2-201ENST00000619201 524 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL356863.1-201ENST00000623378 1080 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL049536.1-201ENST00000625043 744 ntBASIC4.94□□□□□ -1.62
VCPP55072 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.94□□□□□ -1.62
VCPP55072 AL596275.2-204ENST00000641628 552 ntBASIC4.94□□□□□ -1.62
VCPP55072 AL596275.2-206ENST00000641957 626 ntBASIC4.94□□□□□ -1.62
VCPP55072 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.94□□□□□ -1.62
VCPP55072 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VCPP55072 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VCPP55072 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VCPP55072 Y_RNA.333-201ENST00000365274 102 ntBASIC4.93□□□□□ -1.62
VCPP55072 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VCPP55072 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VCPP55072 RNU6-891P-201ENST00000384280 111 ntBASIC4.93□□□□□ -1.62
VCPP55072 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VCPP55072 AC093719.1-202ENST00000392735 373 ntBASIC4.93□□□□□ -1.62
VCPP55072 AL080315.1-201ENST00000406055 466 ntBASIC4.93□□□□□ -1.62
VCPP55072 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.93□□□□□ -1.62
VCPP55072 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.93□□□□□ -1.62
VCPP55072 ARL4AP4-201ENST00000434170 518 ntBASIC4.93□□□□□ -1.62
VCPP55072 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.93□□□□□ -1.62
VCPP55072 VN1R34P-201ENST00000447387 883 ntBASIC4.93□□□□□ -1.62
VCPP55072 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VCPP55072 AC022795.1-201ENST00000473808 480 ntBASIC4.93□□□□□ -1.62
VCPP55072 RPL23AP37-201ENST00000479658 549 ntBASIC4.93□□□□□ -1.62
VCPP55072 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VCPP55072 SCARNA13-201ENST00000516672 275 ntBASIC4.93□□□□□ -1.62
VCPP55072 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.93□□□□□ -1.62
VCPP55072 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.93□□□□□ -1.62
VCPP55072 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.93□□□□□ -1.62
VCPP55072 BUD31P1-201ENST00000521828 359 ntBASIC4.93□□□□□ -1.62
VCPP55072 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.93□□□□□ -1.62
VCPP55072 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.93□□□□□ -1.62
VCPP55072 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.93□□□□□ -1.62
VCPP55072 AC073091.2-201ENST00000603205 907 ntBASIC4.93□□□□□ -1.62
VCPP55072 BNIP3P7-201ENST00000605641 516 ntBASIC4.93□□□□□ -1.62
VCPP55072 AL445567.2-201ENST00000618935 498 ntBASIC4.93□□□□□ -1.62
VCPP55072 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VCPP55072 ASNSP1-201ENST00000518311 1939 ntBASIC4.93□□□□□ -1.62
VCPP55072 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
VCPP55072 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.93□□□□□ -1.62
VCPP55072 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VCPP55072 RAD17P1-201ENST00000418130 2042 ntBASIC4.92□□□□□ -1.62
VCPP55072 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 OR4K17-201ENST00000315543 1032 ntBASIC4.92□□□□□ -1.62
VCPP55072 MIR365B-201ENST00000362317 111 ntBASIC4.92□□□□□ -1.62
VCPP55072 RNU6-525P-201ENST00000363685 104 ntBASIC4.92□□□□□ -1.62
VCPP55072 SNORA62.3-201ENST00000365110 153 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms