Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS2P54868 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS2P54868 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS2P54868 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGCS2P54868 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGCS2P54868 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HMGCS2P54868 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGCS2P54868 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HMGCS2P54868 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGCS2P54868 AP000357.1-201ENST00000409926 1165 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 SNORA79B-201ENST00000410557 148 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 HMGB3P5-201ENST00000428894 612 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 RRM2P4-201ENST00000441721 562 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGCS2P54868 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGCS2P54868 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGCS2P54868 DEFB109A-201ENST00000482450 265 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGCS2P54868 RPS4XP18-201ENST00000495480 763 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGCS2P54868 PGBD4P4-201ENST00000509673 613 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 SNORD116-30-201ENST00000516468 85 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGCS2P54868 AC053481.3-201ENST00000577881 843 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGCS2P54868 AC099669.2-201ENST00000616549 437 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 AC234782.5-201ENST00000617723 324 ntBASIC4.92□□□□□ -1.62
HMGCS2P54868 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HMGCS2P54868 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCS2P54868 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCS2P54868 MAPK10-286ENST00000641208 8747 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCS2P54868 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGCS2P54868 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCS2P54868 OR11H4-201ENST00000315409 1082 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 MTATP6P19-201ENST00000413797 659 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 AC244453.4-201ENST00000419150 388 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCS2P54868 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 FCF1P7-201ENST00000451185 558 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 RNA5SP246-201ENST00000458909 119 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCS2P54868 AC098583.1-201ENST00000480875 255 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 MTND3P6-201ENST00000485242 339 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 RNA5SP143-201ENST00000516936 115 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 AC025857.1-201ENST00000525252 377 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCS2P54868 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGCS2P54868 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGCS2P54868 VN1R81P-201ENST00000602085 372 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 IMMP1LP1-201ENST00000605170 488 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGCS2P54868 AL022393.1-201ENST00000625142 1677 ntBASIC4.91□□□□□ -1.62
HMGCS2P54868 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGCS2P54868 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGCS2P54868 HSPD1P14-201ENST00000432666 1618 ntBASIC4.9□□□□□ -1.62
HMGCS2P54868 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.9□□□□□ -1.62
HMGCS2P54868 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.9□□□□□ -1.62
HMGCS2P54868 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGCS2P54868 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HMGCS2P54868 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HMGCS2P54868 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 MIR1911-201ENST00000410783 80 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCS2P54868 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCS2P54868 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCS2P54868 RPS26P2-201ENST00000440331 348 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 OR52Y1P-201ENST00000452418 828 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 RPS29P19-201ENST00000479709 171 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 CCNHP1-201ENST00000513311 678 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 IFITM8P-201ENST00000522529 394 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 EIF1AXP2-201ENST00000555940 413 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 RPL23AP97-201ENST00000568955 471 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 AC010503.3-201ENST00000594355 540 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCS2P54868 AC138473.1-201ENST00000605717 526 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 MIR8069-1-201ENST00000616627 86 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 MIR8069-2-201ENST00000621412 86 ntBASIC4.9□□□□□ -1.63
HMGCS2P54868 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HMGCS2P54868 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
HMGCS2P54868 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCS2P54868 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HMGCS2P54868 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS2P54868 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HMGCS2P54868 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCS2P54868 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HMGCS2P54868 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 398 ms