Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CENPAP49450 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 RNA5SP284-201ENST00000384547 118 ntBASIC4.76□□□□□ -1.65
CENPAP49450 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL133388.1-201ENST00000404509 287 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL136310.1-201ENST00000404926 654 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL590290.1-201ENST00000405336 380 ntBASIC4.76□□□□□ -1.65
CENPAP49450 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.76□□□□□ -1.65
CENPAP49450 SDHDP6-201ENST00000414693 480 ntBASIC4.76□□□□□ -1.65
CENPAP49450 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.76□□□□□ -1.65
CENPAP49450 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 AC005005.2-201ENST00000420779 380 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 RPL12P28-201ENST00000430852 489 ntBASIC4.76□□□□□ -1.65
CENPAP49450 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.76□□□□□ -1.65
CENPAP49450 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 AC234064.1-201ENST00000436312 247 ntBASIC4.76□□□□□ -1.65
CENPAP49450 SUMO2P3-201ENST00000438311 288 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC073052.1-201ENST00000440417 714 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC064862.4-201ENST00000442180 334 ntBASIC4.76□□□□□ -1.65
CENPAP49450 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 BX842559.2-201ENST00000451418 605 ntBASIC4.76□□□□□ -1.65
CENPAP49450 NAP1L1P3-201ENST00000462291 880 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC021660.1-201ENST00000465006 554 ntBASIC4.76□□□□□ -1.65
CENPAP49450 RPS26P39-201ENST00000469206 341 ntBASIC4.76□□□□□ -1.65
CENPAP49450 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 IGLVIV-64-201ENST00000518581 301 ntBASIC4.76□□□□□ -1.65
CENPAP49450 HMGB1P23-201ENST00000518743 568 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 DEFB109D-201ENST00000529497 240 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 AC139103.1-201ENST00000534696 1030 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.76□□□□□ -1.65
CENPAP49450 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 NIFKP6-201ENST00000598115 845 ntBASIC4.76□□□□□ -1.65
CENPAP49450 EIF1P6-201ENST00000600054 334 ntBASIC4.76□□□□□ -1.65
CENPAP49450 GAS5-AS1-201ENST00000602767 694 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC010200.2-201ENST00000605098 235 ntBASIC4.76□□□□□ -1.65
CENPAP49450 Z99289.3-201ENST00000605586 594 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL583856.2-201ENST00000606298 543 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AC009237.15-201ENST00000610252 501 ntBASIC4.76□□□□□ -1.65
CENPAP49450 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 MIR7973-1-201ENST00000614683 76 ntBASIC4.76□□□□□ -1.65
CENPAP49450 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.76□□□□□ -1.65
CENPAP49450 AC067852.7-201ENST00000623270 535 ntBASIC4.76□□□□□ -1.65
CENPAP49450 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CENPAP49450 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.76□□□□□ -1.65
CENPAP49450 PNPT1P2-201ENST00000456768 2050 ntBASIC4.76□□□□□ -1.65
CENPAP49450 AL731566.1-201ENST00000620490 1937 ntBASIC4.76□□□□□ -1.65
CENPAP49450 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CENPAP49450 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CENPAP49450 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 UBBP2-201ENST00000376781 231 ntBASIC4.75□□□□□ -1.65
CENPAP49450 RNU6-317P-201ENST00000384031 107 ntBASIC4.75□□□□□ -1.65
CENPAP49450 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 CYCSP10-201ENST00000417973 294 ntBASIC4.75□□□□□ -1.65
CENPAP49450 AL513175.2-201ENST00000422071 443 ntBASIC4.75□□□□□ -1.65
CENPAP49450 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 SRSF1P1-201ENST00000424058 520 ntBASIC4.75□□□□□ -1.65
CENPAP49450 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 HMGB1P45-201ENST00000435986 653 ntBASIC4.75□□□□□ -1.65
CENPAP49450 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.75□□□□□ -1.65
CENPAP49450 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 TPTE2P6-202ENST00000445572 1007 ntBASIC4.75□□□□□ -1.65
CENPAP49450 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CENPAP49450 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.75□□□□□ -1.65
CENPAP49450 AC005229.2-201ENST00000456995 399 ntBASIC4.75□□□□□ -1.65
CENPAP49450 RPL23AP12-201ENST00000467573 473 ntBASIC4.75□□□□□ -1.65
CENPAP49450 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.75□□□□□ -1.65
CENPAP49450 AC007998.1-201ENST00000474156 672 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms