Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 AP005597.4-201ENST00000526762 229 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC090424.1-201ENST00000535243 736 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC093519.1-201ENST00000566109 298 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.56□□□□□ -1.36
NFKB1P19838 CKS1BP3-201ENST00000600888 237 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC068790.5-201ENST00000602741 355 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC040896.1-201ENST00000613819 479 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 MIR6085-201ENST00000618314 110 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AL603758.1-201ENST00000618654 241 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC018926.3-201ENST00000618841 406 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 TCL6_3.1-201ENST00000619064 137 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC005858.4-201ENST00000623191 700 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AL732618.1-201ENST00000623251 301 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 UGT2B26P-201ENST00000508672 1613 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 AL354854.1-201ENST00000455940 1363 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
NFKB1P19838 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 SNORD35A-201ENST00000363389 86 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 Y_RNA.159-201ENST00000363674 87 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 RNU1-84P-201ENST00000365447 164 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AL033519.1-201ENST00000407266 307 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 RN7SKP221-201ENST00000410420 301 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 RPL26P29-201ENST00000415623 438 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 RPL7P57-201ENST00000423238 740 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC083862.1-201ENST00000427378 1242 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 CBX1P1-201ENST00000440184 427 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC092809.1-201ENST00000441469 474 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 GAPDHP37-201ENST00000442317 968 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 MTCO1P27-201ENST00000448269 226 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 PPIAP32-201ENST00000449940 472 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 TRGVB-201ENST00000453257 471 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC097493.1-201ENST00000463958 372 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 RPL7P19-201ENST00000469948 618 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC117394.1-201ENST00000477323 567 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 FTH1P8-201ENST00000498161 514 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 AC006499.2-201ENST00000513470 337 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 RNU6-150P-201ENST00000516237 95 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 RNU6-445P-201ENST00000516949 107 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 TRMT10BP1-201ENST00000519377 943 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 PHBP17-201ENST00000528576 541 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.55□□□□□ -1.36
NFKB1P19838 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NFKB1P19838 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 AC055876.1-202ENST00000567053 138 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.55□□□□□ -1.36
NFKB1P19838 MIR744-201ENST00000578242 98 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.55□□□□□ -1.36
NFKB1P19838 AP001180.3-201ENST00000582221 145 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC024267.2-201ENST00000582737 417 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 MIR5010-201ENST00000582846 120 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC233702.7-202ENST00000582941 211 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC006504.6-201ENST00000590142 199 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 BCRP9-201ENST00000605312 388 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AC090525.3-201ENST00000605601 189 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.55□□□□□ -1.36
NFKB1P19838 AL355802.3-201ENST00000607571 545 ntBASIC6.55□□□□□ -1.36
NFKB1P19838 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.55□□□□□ -1.36
NFKB1P19838 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms