Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 SNORD39.3-201ENST00000584451 71 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC008687.2-201ENST00000597865 520 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 BBIP1P1-201ENST00000602999 279 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 DPPA3P3-201ENST00000603842 430 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC080078.3-201ENST00000605407 463 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC015908.5-201ENST00000623289 343 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC009237.3-203ENST00000442128 3551 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 LARP1BP1-201ENST00000506036 1359 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC096921.2-201ENST00000561507 1916 ntBASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB11Q9Y5F2 AC114546.3-201ENST00000623582 1734 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC020978.6-201ENST00000571197 3177 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC102941.1-201ENST00000567616 1537 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL359263.1-201ENST00000441188 2796 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 OFD1P17-201ENST00000437639 3018 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RNY1P12-201ENST00000364251 105 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RNA5SP172-201ENST00000365061 118 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC092634.1-201ENST00000366505 199 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-574P-201ENST00000384265 107 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-196P-201ENST00000384315 107 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SKP62-201ENST00000384539 329 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC234782.4-201ENST00000417646 1048 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL358176.2-201ENST00000425769 204 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL356276.2-201ENST00000435919 558 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 SLC25A18P1-201ENST00000449385 454 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL034399.1-201ENST00000451535 380 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 HMGN3P1-201ENST00000453847 193 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RPS20P32-201ENST00000456044 356 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL356010.1-201ENST00000456364 102 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL590639.1-201ENST00000456484 337 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC007547.1-201ENST00000462177 490 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SL168P-201ENST00000463821 279 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC010301.1-201ENST00000473936 355 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RPL32P9-201ENST00000487963 407 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC005741.1-201ENST00000511094 432 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SKP233-201ENST00000517005 110 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL845552.1-201ENST00000556820 323 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC100830.2-201ENST00000581636 240 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AL022345.1-201ENST00000607292 135 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SL126P-201ENST00000616400 299 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 uc_338.9-201ENST00000617424 182 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 U6.101-201ENST00000637707 76 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 CAP1P2-201ENST00000417455 1409 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
PCDHB11Q9Y5F2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms