Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RN7SKP213-201ENST00000410746 298 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 RPL23AP27-201ENST00000415161 451 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 ATG4AP1-201ENST00000416893 538 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 MTND5P8-201ENST00000449817 1083 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC008410.1-201ENST00000483777 339 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC004815.1-201ENST00000484185 331 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC147055.3-201ENST00000510547 851 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC073091.2-201ENST00000603205 907 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 Z98200.1-201ENST00000607298 470 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AL355802.4-201ENST00000607635 548 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC007342.8-201ENST00000623278 678 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC093311.1-201ENST00000506586 2021 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC109780.1-201ENST00000451768 1344 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 MAPK10-304ENST00000641341 3984 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 AC093535.2-201ENST00000624769 2326 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
DDX47Q9H0S4 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.66
DDX47Q9H0S4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.66
DDX47Q9H0S4 VN2R3P-201ENST00000422626 1412 ntBASIC4.65□□□□□ -1.66
DDX47Q9H0S4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
DDX47Q9H0S4 AC021146.4-201ENST00000309229 279 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 MIR92A2-201ENST00000385299 75 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 RNU6-603P-201ENST00000411403 107 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC011753.3-201ENST00000443436 406 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 RPS15AP29-201ENST00000445539 400 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 HMGB1P26-201ENST00000452520 628 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 RPL5P30-201ENST00000465511 891 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 OR5M14P-201ENST00000506803 618 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 IFITM8P-201ENST00000522529 394 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AL049870.4-201ENST00000555741 486 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 RPL23AP97-201ENST00000568955 471 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AL031666.3-201ENST00000609320 1006 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC116447.1-201ENST00000613153 453 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 KARSP3-201ENST00000571212 1504 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 AC009501.3-201ENST00000605001 1352 ntBASIC4.65□□□□□ -1.67
DDX47Q9H0S4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.65□□□□□ -1.67
DDX47Q9H0S4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 RNA5SP305-201ENST00000362665 119 ntBASIC4.64□□□□□ -1.67
DDX47Q9H0S4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 MIR513A2-201ENST00000385249 127 ntBASIC4.64□□□□□ -1.67
DDX47Q9H0S4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX47Q9H0S4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms