Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL355493.4-201ENST00000618530 292 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC013470.4-201ENST00000619978 986 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC015726.3-201ENST00000624501 418 ntBASIC4.78□□□□□ -1.64
CENPAP49450 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.78□□□□□ -1.64
CENPAP49450 AC017104.5-201ENST00000637647 639 ntBASIC4.78□□□□□ -1.64
CENPAP49450 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CENPAP49450 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.77□□□□□ -1.65
CENPAP49450 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CENPAP49450 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CENPAP49450 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 RNA5SP319-201ENST00000362768 119 ntBASIC4.77□□□□□ -1.65
CENPAP49450 MTCO1P56-201ENST00000401674 224 ntBASIC4.77□□□□□ -1.65
CENPAP49450 SNORA11.3-201ENST00000408471 128 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AL450992.3-201ENST00000413192 568 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 MTND2P16-201ENST00000419987 799 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
CENPAP49450 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 AC002504.1-201ENST00000438281 691 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 AL138899.2-201ENST00000439139 499 ntBASIC4.77□□□□□ -1.65
CENPAP49450 RPL12P11-201ENST00000439970 501 ntBASIC4.77□□□□□ -1.65
CENPAP49450 EEF1A1P39-201ENST00000440791 250 ntBASIC4.77□□□□□ -1.65
CENPAP49450 RPS26P30-201ENST00000443431 335 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 AL929288.2-201ENST00000446368 407 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC105399.1-202ENST00000447303 205 ntBASIC4.77□□□□□ -1.65
CENPAP49450 NPM1P13-201ENST00000452663 865 ntBASIC4.77□□□□□ -1.65
CENPAP49450 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 AC005410.1-202ENST00000460347 485 ntBASIC4.77□□□□□ -1.65
CENPAP49450 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 snoZ278.1-201ENST00000517059 112 ntBASIC4.77□□□□□ -1.65
CENPAP49450 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.77□□□□□ -1.65
CENPAP49450 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 MTCO1P40-201ENST00000574371 625 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
CENPAP49450 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 CCDC58P3-201ENST00000590792 430 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 AC245036.5-201ENST00000596330 847 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.77□□□□□ -1.65
CENPAP49450 AC009597.2-201ENST00000604659 592 ntBASIC4.77□□□□□ -1.65
CENPAP49450 BNIP3P4-201ENST00000604946 565 ntBASIC4.77□□□□□ -1.65
CENPAP49450 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 SNORA11.6-201ENST00000619030 128 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC067931.1-201ENST00000624190 671 ntBASIC4.77□□□□□ -1.65
CENPAP49450 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.77□□□□□ -1.65
CENPAP49450 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CENPAP49450 AC023421.1-201ENST00000590535 1785 ntBASIC4.77□□□□□ -1.65
CENPAP49450 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CENPAP49450 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.77□□□□□ -1.65
CENPAP49450 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.77□□□□□ -1.65
CENPAP49450 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 MTND4P10-201ENST00000446199 1363 ntBASIC4.77□□□□□ -1.65
CENPAP49450 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CENPAP49450 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CENPAP49450 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.76□□□□□ -1.65
CENPAP49450 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 RNF6P1-201ENST00000444889 1784 ntBASIC4.76□□□□□ -1.65
CENPAP49450 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CENPAP49450 RNU4-51P-201ENST00000364206 140 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms