Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC109462.1-201ENST00000491087 368 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AC006499.3-201ENST00000506077 748 ntBASIC5.29□□□□□ -1.56
KRT9P35527 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AC004980.4-201ENST00000513375 203 ntBASIC5.29□□□□□ -1.56
KRT9P35527 RNA5SP464-201ENST00000516251 108 ntBASIC5.29□□□□□ -1.56
KRT9P35527 RNA5SP43-201ENST00000516559 110 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.29□□□□□ -1.56
KRT9P35527 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AC093799.2-201ENST00000610062 578 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AL512624.1-201ENST00000613638 469 ntBASIC5.29□□□□□ -1.56
KRT9P35527 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.29□□□□□ -1.56
KRT9P35527 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT9P35527 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT9P35527 AC019206.1-201ENST00000621938 425 ntBASIC5.29□□□□□ -1.56
KRT9P35527 AC016717.3-201ENST00000624730 554 ntBASIC5.29□□□□□ -1.56
KRT9P35527 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT9P35527 AC092162.3-201ENST00000624511 1624 ntBASIC5.29□□□□□ -1.56
KRT9P35527 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
KRT9P35527 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT9P35527 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT9P35527 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 CIR1P2-201ENST00000514821 1342 ntBASIC5.28□□□□□ -1.56
KRT9P35527 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 AC008758.3-201ENST00000507003 1829 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC090971.4-201ENST00000560291 1800 ntBASIC5.28□□□□□ -1.56
KRT9P35527 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.28□□□□□ -1.56
KRT9P35527 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 U8.4-201ENST00000363626 134 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RNU6-1176P-201ENST00000390955 107 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AL021331.1-201ENST00000402817 582 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RPL31P52-201ENST00000407532 367 ntBASIC5.28□□□□□ -1.56
KRT9P35527 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT9P35527 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT9P35527 GJA6P-201ENST00000415117 1042 ntBASIC5.28□□□□□ -1.56
KRT9P35527 FABP7P1-201ENST00000424004 391 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RPL12P28-201ENST00000430852 489 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RPS20P1-201ENST00000434853 354 ntBASIC5.28□□□□□ -1.56
KRT9P35527 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT9P35527 GXYLT1P1-201ENST00000446657 490 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC000111.2-201ENST00000448200 210 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RPL37P3-201ENST00000456825 293 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT9P35527 AC008953.1-201ENST00000497334 318 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC010374.1-201ENST00000503762 1237 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RNU6-709P-201ENST00000517257 104 ntBASIC5.28□□□□□ -1.56
KRT9P35527 HMGB1P19-201ENST00000517578 577 ntBASIC5.28□□□□□ -1.56
KRT9P35527 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KRT9P35527 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT9P35527 AC011611.5-201ENST00000552477 578 ntBASIC5.28□□□□□ -1.56
KRT9P35527 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.28□□□□□ -1.56
KRT9P35527 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.28□□□□□ -1.56
KRT9P35527 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT9P35527 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT9P35527 TVP23CP2-201ENST00000571473 623 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 AC006116.7-201ENST00000590141 756 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT9P35527 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 AC090948.2-201ENST00000607363 564 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AL627230.1-201ENST00000613077 211 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AL591926.8-201ENST00000616876 211 ntBASIC5.28□□□□□ -1.56
KRT9P35527 AL138955.1-201ENST00000622881 1040 ntBASIC5.28□□□□□ -1.56
KRT9P35527 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT9P35527 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRT9P35527 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
KRT9P35527 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT9P35527 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.27□□□□□ -1.57
KRT9P35527 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
KRT9P35527 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 RN7SKP224-201ENST00000364140 325 ntBASIC5.27□□□□□ -1.57
KRT9P35527 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KRT9P35527 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT9P35527 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 AL355615.1-201ENST00000406187 641 ntBASIC5.27□□□□□ -1.57
KRT9P35527 BMS1P13-201ENST00000417301 885 ntBASIC5.27□□□□□ -1.57
KRT9P35527 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT9P35527 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT9P35527 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.27□□□□□ -1.57
KRT9P35527 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT9P35527 RPS27P18-201ENST00000431701 247 ntBASIC5.27□□□□□ -1.57
KRT9P35527 LYPLA1P1-201ENST00000434514 622 ntBASIC5.27□□□□□ -1.57
KRT9P35527 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.27□□□□□ -1.57
KRT9P35527 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms