Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CPS1P31327 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CPS1P31327 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CPS1P31327 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CPS1P31327 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CPS1P31327 AL592291.1-201ENST00000403830 352 ntBASIC5.98□□□□□ -1.45
CPS1P31327 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.98□□□□□ -1.45
CPS1P31327 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CPS1P31327 SETP6-201ENST00000479329 568 ntBASIC5.98□□□□□ -1.45
CPS1P31327 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.98□□□□□ -1.45
CPS1P31327 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.98□□□□□ -1.45
CPS1P31327 AL592436.1-201ENST00000605135 558 ntBASIC5.98□□□□□ -1.45
CPS1P31327 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.98□□□□□ -1.45
CPS1P31327 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.98□□□□□ -1.45
CPS1P31327 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.98□□□□□ -1.45
CPS1P31327 AC234782.5-201ENST00000617723 324 ntBASIC5.98□□□□□ -1.45
CPS1P31327 AP000432.2-201ENST00000624164 2048 ntBASIC5.97□□□□□ -1.45
CPS1P31327 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.97□□□□□ -1.45
CPS1P31327 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CPS1P31327 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.97□□□□□ -1.45
CPS1P31327 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 OR56B2P-201ENST00000317102 954 ntBASIC5.97□□□□□ -1.45
CPS1P31327 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 RNU2-65P-201ENST00000410162 185 ntBASIC5.97□□□□□ -1.45
CPS1P31327 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.97□□□□□ -1.45
CPS1P31327 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.97□□□□□ -1.45
CPS1P31327 VN1R32P-201ENST00000452234 905 ntBASIC5.97□□□□□ -1.45
CPS1P31327 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
CPS1P31327 RPL35AP15-201ENST00000468042 339 ntBASIC5.97□□□□□ -1.45
CPS1P31327 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.97□□□□□ -1.45
CPS1P31327 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.97□□□□□ -1.45
CPS1P31327 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 ATP1B1P1-201ENST00000509767 915 ntBASIC5.97□□□□□ -1.45
CPS1P31327 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.97□□□□□ -1.45
CPS1P31327 AL359219.2-201ENST00000555184 348 ntBASIC5.97□□□□□ -1.45
CPS1P31327 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.97□□□□□ -1.45
CPS1P31327 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.97□□□□□ -1.45
CPS1P31327 MIMT1-201ENST00000597105 1050 ntBASIC5.97□□□□□ -1.45
CPS1P31327 IMMP1LP1-201ENST00000605170 488 ntBASIC5.97□□□□□ -1.45
CPS1P31327 U3.45-201ENST00000607547 219 ntBASIC5.97□□□□□ -1.45
CPS1P31327 AC016957.2-201ENST00000616998 848 ntBASIC5.97□□□□□ -1.45
CPS1P31327 MIR7975-201ENST00000619350 68 ntBASIC5.97□□□□□ -1.45
CPS1P31327 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CPS1P31327 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CPS1P31327 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CPS1P31327 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CPS1P31327 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CPS1P31327 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 RNU6-1279P-201ENST00000383917 103 ntBASIC5.96□□□□□ -1.46
CPS1P31327 SYF2P2-201ENST00000417620 583 ntBASIC5.96□□□□□ -1.46
CPS1P31327 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 OR6C71P-201ENST00000432580 913 ntBASIC5.96□□□□□ -1.46
CPS1P31327 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.96□□□□□ -1.46
CPS1P31327 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.96□□□□□ -1.46
CPS1P31327 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.96□□□□□ -1.46
CPS1P31327 RPL23AP94-201ENST00000512518 302 ntBASIC5.96□□□□□ -1.46
CPS1P31327 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.96□□□□□ -1.46
CPS1P31327 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.96□□□□□ -1.46
CPS1P31327 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CPS1P31327 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
CPS1P31327 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CPS1P31327 AP002512.4-202ENST00000641599 4530 ntBASIC5.96□□□□□ -1.46
CPS1P31327 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CPS1P31327 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.95□□□□□ -1.46
CPS1P31327 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CPS1P31327 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CPS1P31327 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.95□□□□□ -1.46
CPS1P31327 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.95□□□□□ -1.46
CPS1P31327 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.95□□□□□ -1.46
CPS1P31327 RPL23AP46-201ENST00000438548 490 ntBASIC5.95□□□□□ -1.46
CPS1P31327 PPIAP3-201ENST00000450588 505 ntBASIC5.95□□□□□ -1.46
CPS1P31327 RPS29P2-201ENST00000479278 136 ntBASIC5.95□□□□□ -1.46
CPS1P31327 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.95□□□□□ -1.46
CPS1P31327 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.95□□□□□ -1.46
CPS1P31327 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CPS1P31327 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.95□□□□□ -1.46
CPS1P31327 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CPS1P31327 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.95□□□□□ -1.46
CPS1P31327 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.95□□□□□ -1.46
CPS1P31327 AL031985.2-201ENST00000600955 480 ntBASIC5.95□□□□□ -1.46
CPS1P31327 AL021997.2-201ENST00000615674 271 ntBASIC5.95□□□□□ -1.46
CPS1P31327 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CPS1P31327 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CPS1P31327 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CPS1P31327 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.95□□□□□ -1.46
CPS1P31327 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms