Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.45□□□□□ -1.38
THBS1P07996 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
THBS1P07996 RNU4-81P-201ENST00000363561 144 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RNU12-2P-201ENST00000364789 156 ntBASIC6.45□□□□□ -1.38
THBS1P07996 MIR138-2-201ENST00000384916 84 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RPS3AP5-201ENST00000389400 821 ntBASIC6.45□□□□□ -1.38
THBS1P07996 FAUP2-201ENST00000394301 401 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AL591416.1-201ENST00000404015 867 ntBASIC6.45□□□□□ -1.38
THBS1P07996 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.45□□□□□ -1.38
THBS1P07996 MIR548I3-201ENST00000408378 149 ntBASIC6.45□□□□□ -1.38
THBS1P07996 MIR548I1-201ENST00000408810 149 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RNU6-193P-201ENST00000410977 107 ntBASIC6.45□□□□□ -1.38
THBS1P07996 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 RPL23AP19-201ENST00000436229 369 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC011742.2-201ENST00000443818 352 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RPS7P4-201ENST00000444127 582 ntBASIC6.45□□□□□ -1.38
THBS1P07996 SLC25A18P1-201ENST00000449385 454 ntBASIC6.45□□□□□ -1.38
THBS1P07996 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.45□□□□□ -1.38
THBS1P07996 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.45□□□□□ -1.38
THBS1P07996 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.45□□□□□ -1.38
THBS1P07996 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 TECRP2-201ENST00000503270 928 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.45□□□□□ -1.38
THBS1P07996 AC010587.1-201ENST00000505809 469 ntBASIC6.45□□□□□ -1.38
THBS1P07996 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 RPL39P5-202ENST00000512505 151 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RNU4-29P-201ENST00000515943 174 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC009812.2-201ENST00000517657 457 ntBASIC6.45□□□□□ -1.38
THBS1P07996 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.45□□□□□ -1.38
THBS1P07996 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.45□□□□□ -1.38
THBS1P07996 OR5M6P-201ENST00000530227 937 ntBASIC6.45□□□□□ -1.38
THBS1P07996 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.45□□□□□ -1.38
THBS1P07996 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.45□□□□□ -1.38
THBS1P07996 AC010653.1-201ENST00000571108 881 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC005357.1-201ENST00000588399 301 ntBASIC6.45□□□□□ -1.38
THBS1P07996 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 AC113194.1-201ENST00000606037 500 ntBASIC6.45□□□□□ -1.38
THBS1P07996 RNU6-89P-201ENST00000606519 100 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC004908.1-201ENST00000606572 541 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC097641.3-201ENST00000613523 464 ntBASIC6.45□□□□□ -1.38
THBS1P07996 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AC131009.3-201ENST00000621809 287 ntBASIC6.45□□□□□ -1.38
THBS1P07996 AL359757.2-201ENST00000624309 274 ntBASIC6.45□□□□□ -1.38
THBS1P07996 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 AC011471.4-201ENST00000638271 216 ntBASIC6.45□□□□□ -1.38
THBS1P07996 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
THBS1P07996 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 AC129502.1-201ENST00000623261 1654 ntBASIC6.45□□□□□ -1.38
THBS1P07996 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
THBS1P07996 IMMTP1-201ENST00000435590 2219 ntBASIC6.45□□□□□ -1.38
THBS1P07996 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.45□□□□□ -1.38
THBS1P07996 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
THBS1P07996 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.44□□□□□ -1.38
THBS1P07996 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.44□□□□□ -1.38
THBS1P07996 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 AL049780.3-201ENST00000624612 1583 ntBASIC6.44□□□□□ -1.38
THBS1P07996 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.44□□□□□ -1.38
THBS1P07996 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 AC130304.1-201ENST00000622942 2385 ntBASIC6.44□□□□□ -1.38
THBS1P07996 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
THBS1P07996 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.44□□□□□ -1.38
THBS1P07996 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
THBS1P07996 Y_RNA.148-201ENST00000363557 117 ntBASIC6.44□□□□□ -1.38
THBS1P07996 RNU4-7P-201ENST00000364758 141 ntBASIC6.44□□□□□ -1.38
THBS1P07996 Y_RNA.557-201ENST00000384680 107 ntBASIC6.44□□□□□ -1.38
THBS1P07996 MIR541-201ENST00000401360 84 ntBASIC6.44□□□□□ -1.38
THBS1P07996 AL121834.1-202ENST00000404494 277 ntBASIC6.44□□□□□ -1.38
THBS1P07996 AL096800.1-201ENST00000405326 893 ntBASIC6.44□□□□□ -1.38
THBS1P07996 SNORA11D-201ENST00000408548 128 ntBASIC6.44□□□□□ -1.38
THBS1P07996 SNORA11E-201ENST00000408778 128 ntBASIC6.44□□□□□ -1.38
THBS1P07996 RNU2-28P-201ENST00000410457 189 ntBASIC6.44□□□□□ -1.38
THBS1P07996 Y_RNA.615-201ENST00000410769 117 ntBASIC6.44□□□□□ -1.38
THBS1P07996 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.44□□□□□ -1.38
THBS1P07996 TXNP5-201ENST00000441043 315 ntBASIC6.44□□□□□ -1.38
THBS1P07996 FAM103A2P-201ENST00000444122 354 ntBASIC6.44□□□□□ -1.38
THBS1P07996 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.44□□□□□ -1.38
THBS1P07996 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms