Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HS3ST4Q9Y661 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 ZNF815P-204ENST00000434898 1737 ntBASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HS3ST4Q9Y661 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HS3ST4Q9Y661 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 AC104417.2-201ENST00000562989 1793 ntBASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 AL160286.2-201ENST00000567150 934 ntBASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 AC026471.5-201ENST00000615068 467 ntBASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 AC131212.4-201ENST00000623606 975 ntBASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.01■□□□□ 0.79
HS3ST4Q9Y661 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
HS3ST4Q9Y661 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HS3ST4Q9Y661 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20■□□□□ 0.79
HS3ST4Q9Y661 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 NUDT16P1-203ENST00000513809 620 ntBASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 MIR4785-201ENST00000585005 73 ntBASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HS3ST4Q9Y661 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 SLC25A24-204ENST00000569674 2357 ntBASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 AL355355.2-201ENST00000442321 338 ntBASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 Z85996.1-201ENST00000494644 937 ntBASIC19.98■□□□□ 0.79
HS3ST4Q9Y661 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms