Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 YBX1P10-201ENST00000444752 975 ntBASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 AC007952.6-201ENST00000573168 2673 ntBASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 AC003957.1-201ENST00000625108 2673 ntBASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A3BPQ9Y5P4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 KRT17P2-201ENST00000300992 1314 ntBASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A3BPQ9Y5P4 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 AP002982.1-201ENST00000492365 877 ntBASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 MIR4785-201ENST00000585005 73 ntBASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 AC073195.1-201ENST00000607241 877 ntBASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 AL353708.3-201ENST00000610272 989 ntBASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A3BPQ9Y5P4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 CD177P1-201ENST00000606252 935 ntBASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL4A3BPQ9Y5P4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL4A3BPQ9Y5P4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
COL4A3BPQ9Y5P4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
COL4A3BPQ9Y5P4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 FAM197Y1-201ENST00000421178 764 ntBASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 KRT18P16-201ENST00000510337 1294 ntBASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
COL4A3BPQ9Y5P4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 AC116562.4-201ENST00000641316 2276 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms