Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 AC104076.2-201ENST00000448912 469 ntBASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 KRT126P-201ENST00000549467 1181 ntBASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 MIR2861-201ENST00000636310 90 ntBASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NOTCH3Q9UM47 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NOTCH3Q9UM47 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 B3GAT3P1-201ENST00000471720 806 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 FP700111.2-201ENST00000619190 1892 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 ATP5G1P1-201ENST00000448724 379 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 AC063952.2-201ENST00000498792 1227 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 NAPSB-206ENST00000562112 1266 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 FSCN1P1-201ENST00000568912 1481 ntBASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.95□□□□□ -0.02
NOTCH3Q9UM47 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 BX664615.1-201ENST00000443558 458 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms