Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 AL117328.2-201ENST00000624617 1940 ntBASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 AC009065.1-201ENST00000564055 1225 ntBASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
RIMBP3Q9UFD9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 KRT8P41-201ENST00000533985 1514 ntBASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 AC139887.3-201ENST00000568585 713 ntBASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
RIMBP3Q9UFD9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.03■■■□□ 2.56
RIMBP3Q9UFD9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 CYMP-203ENST00000474680 1263 ntBASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 AL160286.2-201ENST00000567150 934 ntBASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIMBP3Q9UFD9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.01■■■□□ 2.55
RIMBP3Q9UFD9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 MIR662-201ENST00000384847 95 ntBASIC31■■■□□ 2.55
RIMBP3Q9UFD9 AC145285.3-201ENST00000564603 959 ntBASIC31■■■□□ 2.55
RIMBP3Q9UFD9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RIMBP3Q9UFD9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 IGHV3-47-201ENST00000425060 335 ntBASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 NMU-202ENST00000505262 693 ntTSL 3 BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 ZNF259P1-201ENST00000407656 1365 ntBASIC30.99■■■□□ 2.55
RIMBP3Q9UFD9 YBX2P1-201ENST00000394192 760 ntBASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 AF186996.4-201ENST00000467186 377 ntBASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms