Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.56■■□□□ 1.2
RBM28Q9NW13 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.56■■□□□ 1.2
RBM28Q9NW13 AF186192.3-201ENST00000583427 947 ntBASIC22.56■■□□□ 1.2
RBM28Q9NW13 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.56■■□□□ 1.2
RBM28Q9NW13 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.56■■□□□ 1.2
RBM28Q9NW13 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.56■■□□□ 1.2
RBM28Q9NW13 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RBM28Q9NW13 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 AL445675.2-201ENST00000620291 557 ntBASIC22.55■■□□□ 1.2
RBM28Q9NW13 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 AC104417.2-201ENST00000562989 1793 ntBASIC22.55■■□□□ 1.2
RBM28Q9NW13 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RBM28Q9NW13 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
RBM28Q9NW13 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 KSR1P1-201ENST00000446298 240 ntBASIC22.54■■□□□ 1.2
RBM28Q9NW13 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RBM28Q9NW13 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RBM28Q9NW13 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AC012618.2-201ENST00000428058 849 ntBASIC22.53■■□□□ 1.2
RBM28Q9NW13 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RBM28Q9NW13 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AC073195.1-201ENST00000607241 877 ntBASIC22.53■■□□□ 1.2
RBM28Q9NW13 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 Z82202.1-201ENST00000623446 1880 ntBASIC22.53■■□□□ 1.2
RBM28Q9NW13 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.53■■□□□ 1.2
RBM28Q9NW13 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RBM28Q9NW13 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RBM28Q9NW13 RPS2P55-201ENST00000397318 883 ntBASIC22.52■■□□□ 1.2
RBM28Q9NW13 AC107956.1-201ENST00000494359 873 ntBASIC22.52■■□□□ 1.2
RBM28Q9NW13 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 AL160286.2-201ENST00000567150 934 ntBASIC22.52■■□□□ 1.2
RBM28Q9NW13 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 AP006294.2-201ENST00000641667 209 ntBASIC22.52■■□□□ 1.2
RBM28Q9NW13 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RBM28Q9NW13 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RBM28Q9NW13 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.51■■□□□ 1.19
RBM28Q9NW13 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RBM28Q9NW13 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.51■■□□□ 1.19
RBM28Q9NW13 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RBM28Q9NW13 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms