Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 AL441883.1-201ENST00000566170 1045 ntBASIC20.62■□□□□ 0.89
TLR9Q9NR96 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 AC093458.2-201ENST00000623150 629 ntBASIC20.62■□□□□ 0.89
TLR9Q9NR96 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.62■□□□□ 0.89
TLR9Q9NR96 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 AC026396.1-201ENST00000419388 421 ntBASIC20.61■□□□□ 0.89
TLR9Q9NR96 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TLR9Q9NR96 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR9Q9NR96 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 AC008622.2-201ENST00000617006 1229 ntBASIC20.6■□□□□ 0.89
TLR9Q9NR96 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR9Q9NR96 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
TLR9Q9NR96 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 AP003041.3-201ENST00000527151 707 ntBASIC20.59■□□□□ 0.89
TLR9Q9NR96 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 CKBP1-201ENST00000565489 1086 ntBASIC20.59■□□□□ 0.89
TLR9Q9NR96 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR9Q9NR96 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 BX119927.1-201ENST00000636596 1552 ntBASIC20.59■□□□□ 0.89
TLR9Q9NR96 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR9Q9NR96 AC005332.1-201ENST00000577698 1310 ntBASIC20.58■□□□□ 0.89
TLR9Q9NR96 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR9Q9NR96 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.58■□□□□ 0.89
TLR9Q9NR96 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.58■□□□□ 0.89
TLR9Q9NR96 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms