Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYLDQ9NQC7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 C1QL1P1-201ENST00000568105 661 ntBASIC20.56■□□□□ 0.88
CYLDQ9NQC7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 AL353708.3-201ENST00000610272 989 ntBASIC20.56■□□□□ 0.88
CYLDQ9NQC7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYLDQ9NQC7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 AL020996.1-203ENST00000536896 2307 ntBASIC20.55■□□□□ 0.88
CYLDQ9NQC7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CYLDQ9NQC7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.54■□□□□ 0.88
CYLDQ9NQC7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.53■□□□□ 0.88
CYLDQ9NQC7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 TSPY7P-201ENST00000431358 1114 ntBASIC20.53■□□□□ 0.88
CYLDQ9NQC7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.53■□□□□ 0.88
CYLDQ9NQC7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms