Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 AL589743.5-201ENST00000616611 1050 ntBASIC19.28■□□□□ 0.68
SSU72Q9NP77 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SSU72Q9NP77 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSU72Q9NP77 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSU72Q9NP77 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSU72Q9NP77 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.27■□□□□ 0.67
SSU72Q9NP77 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSU72Q9NP77 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSU72Q9NP77 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SSU72Q9NP77 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SSU72Q9NP77 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.27■□□□□ 0.67
SSU72Q9NP77 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 AC104417.2-201ENST00000562989 1793 ntBASIC19.26■□□□□ 0.67
SSU72Q9NP77 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSU72Q9NP77 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSU72Q9NP77 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 CNN2P6-201ENST00000439038 900 ntBASIC19.25■□□□□ 0.67
SSU72Q9NP77 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSU72Q9NP77 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SSU72Q9NP77 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSU72Q9NP77 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.24■□□□□ 0.67
SSU72Q9NP77 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms