Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD8Q9HCK8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD8Q9HCK8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD8Q9HCK8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 FAM8A3P-201ENST00000427218 844 ntBASIC18.14■□□□□ 0.49
CHD8Q9HCK8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.14■□□□□ 0.49
CHD8Q9HCK8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 KRT16P6-202ENST00000425692 1426 ntBASIC18.14■□□□□ 0.49
CHD8Q9HCK8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 TUBB8P6-201ENST00000436895 1288 ntBASIC18.14■□□□□ 0.49
CHD8Q9HCK8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 AC139887.3-201ENST00000568585 713 ntBASIC18.14■□□□□ 0.49
CHD8Q9HCK8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHD8Q9HCK8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 KRT8P26-201ENST00000534154 1276 ntBASIC18.13■□□□□ 0.49
CHD8Q9HCK8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 LINC01465-201ENST00000408887 1940 ntBASIC18.13■□□□□ 0.49
CHD8Q9HCK8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 AC074051.2-201ENST00000565115 352 ntBASIC18.13■□□□□ 0.49
CHD8Q9HCK8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD8Q9HCK8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 RPSAP43-201ENST00000402237 625 ntBASIC18.12■□□□□ 0.49
CHD8Q9HCK8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 RPL13AP23-201ENST00000480739 586 ntBASIC18.12■□□□□ 0.49
CHD8Q9HCK8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 AC104819.1-201ENST00000504587 486 ntBASIC18.12■□□□□ 0.49
CHD8Q9HCK8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 RNF126P1-202ENST00000569893 925 ntBASIC18.12■□□□□ 0.49
CHD8Q9HCK8 ECEL1P1-201ENST00000373592 1742 ntBASIC18.12■□□□□ 0.49
CHD8Q9HCK8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD8Q9HCK8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms