Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 MTDHP1-201ENST00000605323 784 ntBASIC24.49■■□□□ 1.51
CHMP4BQ9H444 AC069544.1-201ENST00000609399 999 ntBASIC24.49■■□□□ 1.51
CHMP4BQ9H444 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHMP4BQ9H444 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHMP4BQ9H444 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 AC104417.2-201ENST00000562989 1793 ntBASIC24.47■■□□□ 1.51
CHMP4BQ9H444 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CHMP4BQ9H444 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.46■■□□□ 1.51
CHMP4BQ9H444 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHMP4BQ9H444 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHMP4BQ9H444 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHMP4BQ9H444 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
CHMP4BQ9H444 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms