Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 MIR4787-201ENST00000607364 84 ntBASIC18.49■□□□□ 0.55
VCX3BQ9H321 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 CROCCP1-201ENST00000426910 5675 ntBASIC18.48■□□□□ 0.55
VCX3BQ9H321 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 AP001271.2-201ENST00000624018 1556 ntBASIC18.48■□□□□ 0.55
VCX3BQ9H321 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 SLC47A1P1-202ENST00000449666 945 ntBASIC18.48■□□□□ 0.55
VCX3BQ9H321 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.48■□□□□ 0.55
VCX3BQ9H321 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCX3BQ9H321 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 AC099398.1-201ENST00000567919 2776 ntBASIC18.47■□□□□ 0.55
VCX3BQ9H321 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ABHD17AP5-201ENST00000580133 923 ntBASIC18.47■□□□□ 0.55
VCX3BQ9H321 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCX3BQ9H321 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
VCX3BQ9H321 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 TSPY9P-201ENST00000440215 945 ntBASIC18.46■□□□□ 0.55
VCX3BQ9H321 TSPY11P-201ENST00000442607 1045 ntBASIC18.46■□□□□ 0.55
VCX3BQ9H321 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 AL138724.1-201ENST00000606771 1088 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms