Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 HNRNPA1P21-201ENST00000424115 961 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 MRPS10P2-201ENST00000431226 381 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL445183.1-201ENST00000447867 467 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 HMGN1P5-201ENST00000448591 263 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 TRAPPC12-AS1-201ENST00000453806 908 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 RPL7P40-201ENST00000481703 745 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 TERF1P3-201ENST00000505638 1227 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 MTND3P24-201ENST00000506306 329 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC004217.3-201ENST00000551552 878 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC004004.1-201ENST00000603784 250 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC211469.1-201ENST00000604263 394 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL365400.2-201ENST00000605604 902 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AL157786.1-207ENST00000627771 695 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 AC087741.3-201ENST00000624270 1347 ntBASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-3Q9BYR6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 OR2Y1-201ENST00000307832 1058 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 RN7SKP163-201ENST00000363221 330 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 MAGT1-202ENST00000373336 962 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 ELOCP17-201ENST00000414751 326 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC093899.1-201ENST00000457984 376 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AF250324.1-202ENST00000511785 979 ntTSL 2 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC245128.3-201ENST00000594721 748 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC016394.1-201ENST00000608444 833 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC093388.1-201ENST00000609166 430 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AC139713.2-207ENST00000641556 1292 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 MTND4P21-201ENST00000453886 1357 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 MTND5P17-201ENST00000418405 1603 ntBASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP3-3Q9BYR6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 CR848007.1-201ENST00000442354 1699 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 ZNF200-209ENST00000575948 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 RAB9AP4-201ENST00000415230 609 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 C1DP2-201ENST00000418167 426 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AL137244.1-201ENST00000422931 865 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 ADH5P2-201ENST00000425922 1124 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AL590004.3-202ENST00000445883 451 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AL133353.1-201ENST00000452391 303 ntTSL 5 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 RSU1P1-201ENST00000453416 441 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms