Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 AC124283.5-201ENST00000624661 1809 ntBASIC22.53■■□□□ 1.2
SDF4Q9BRK5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SDF4Q9BRK5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 AC124016.1-201ENST00000609552 612 ntBASIC22.52■■□□□ 1.2
SDF4Q9BRK5 AL121829.2-201ENST00000620908 328 ntBASIC22.52■■□□□ 1.2
SDF4Q9BRK5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 BX323043.1-201ENST00000641006 1765 ntBASIC22.52■■□□□ 1.2
SDF4Q9BRK5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.52■■□□□ 1.2
SDF4Q9BRK5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 KRASP1-201ENST00000407852 552 ntBASIC22.51■■□□□ 1.19
SDF4Q9BRK5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 AC133681.1-201ENST00000465482 601 ntBASIC22.51■■□□□ 1.19
SDF4Q9BRK5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 AL121906.2-201ENST00000621597 723 ntBASIC22.51■■□□□ 1.19
SDF4Q9BRK5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SDF4Q9BRK5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 AC008550.1-201ENST00000511500 884 ntBASIC22.5■■□□□ 1.19
SDF4Q9BRK5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 AP000974.1-201ENST00000623909 2387 ntBASIC22.5■■□□□ 1.19
SDF4Q9BRK5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SDF4Q9BRK5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SDF4Q9BRK5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms