Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMSS1Q9BQ75 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 NOC2LP1-202ENST00000452600 2235 ntBASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 AC008694.1-202ENST00000636953 945 ntBASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMSS1Q9BQ75 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 AC093503.3-201ENST00000624917 2352 ntBASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 CNN2P6-201ENST00000439038 900 ntBASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 AC023632.3-201ENST00000521633 145 ntBASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 AC020916.1-201ENST00000587762 1774 ntBASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CMSS1Q9BQ75 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 AL355472.2-201ENST00000422958 438 ntBASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 DUX4L16-201ENST00000555130 1264 ntBASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 AL589743.5-201ENST00000616611 1050 ntBASIC16.54■□□□□ 0.24
CMSS1Q9BQ75 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms