Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FAAHP1-202ENST00000446499 1238 ntBASIC26■■□□□ 1.75
ABCA3Q99758 RASA4DP-201ENST00000460726 1199 ntBASIC26■■□□□ 1.75
ABCA3Q99758 AC092597.1-201ENST00000487352 616 ntBASIC26■■□□□ 1.75
ABCA3Q99758 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC26■■□□□ 1.75
ABCA3Q99758 TPSP2-201ENST00000561760 610 ntBASIC26■■□□□ 1.75
ABCA3Q99758 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
ABCA3Q99758 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
ABCA3Q99758 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ABCA3Q99758 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ABCA3Q99758 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.99■■□□□ 1.75
ABCA3Q99758 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.99■■□□□ 1.75
ABCA3Q99758 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.99■■□□□ 1.75
ABCA3Q99758 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.99■■□□□ 1.75
ABCA3Q99758 AC092329.2-201ENST00000598402 547 ntBASIC25.99■■□□□ 1.75
ABCA3Q99758 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ABCA3Q99758 AC007225.1-201ENST00000566331 1836 ntBASIC25.98■■□□□ 1.75
ABCA3Q99758 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ABCA3Q99758 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.98■■□□□ 1.75
ABCA3Q99758 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ABCA3Q99758 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC25.98■■□□□ 1.75
ABCA3Q99758 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.98■■□□□ 1.75
ABCA3Q99758 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC25.98■■□□□ 1.75
ABCA3Q99758 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.98■■□□□ 1.75
ABCA3Q99758 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.98■■□□□ 1.75
ABCA3Q99758 FBXW4P1-201ENST00000426721 2239 ntBASIC25.98■■□□□ 1.75
ABCA3Q99758 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 KRT18P1-202ENST00000452408 1331 ntBASIC25.97■■□□□ 1.75
ABCA3Q99758 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.97■■□□□ 1.75
ABCA3Q99758 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.97■■□□□ 1.75
ABCA3Q99758 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
ABCA3Q99758 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ABCA3Q99758 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.97■■□□□ 1.75
ABCA3Q99758 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.97■■□□□ 1.75
ABCA3Q99758 EMBP1-201ENST00000458200 901 ntBASIC25.97■■□□□ 1.75
ABCA3Q99758 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.97■■□□□ 1.75
ABCA3Q99758 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.97■■□□□ 1.75
ABCA3Q99758 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.96■■□□□ 1.75
ABCA3Q99758 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.96■■□□□ 1.75
ABCA3Q99758 AC016734.2-201ENST00000624325 1377 ntBASIC25.96■■□□□ 1.75
ABCA3Q99758 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC25.96■■□□□ 1.75
ABCA3Q99758 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
ABCA3Q99758 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
ABCA3Q99758 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
ABCA3Q99758 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA3Q99758 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
ABCA3Q99758 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.95■■□□□ 1.75
ABCA3Q99758 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA3Q99758 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
ABCA3Q99758 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA3Q99758 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
ABCA3Q99758 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA3Q99758 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA3Q99758 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA3Q99758 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA3Q99758 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA3Q99758 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA3Q99758 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.94■■□□□ 1.74
ABCA3Q99758 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA3Q99758 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA3Q99758 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA3Q99758 AL845331.1-201ENST00000424978 1190 ntBASIC25.94■■□□□ 1.74
ABCA3Q99758 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC25.94■■□□□ 1.74
ABCA3Q99758 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
ABCA3Q99758 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA3Q99758 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA3Q99758 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC25.94■■□□□ 1.74
ABCA3Q99758 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA3Q99758 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA3Q99758 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC25.94■■□□□ 1.74
ABCA3Q99758 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA3Q99758 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
ABCA3Q99758 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
ABCA3Q99758 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA3Q99758 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.93■■□□□ 1.74
ABCA3Q99758 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA3Q99758 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.93■■□□□ 1.74
ABCA3Q99758 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA3Q99758 AL121672.3-201ENST00000608644 468 ntBASIC25.93■■□□□ 1.74
ABCA3Q99758 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.93■■□□□ 1.74
ABCA3Q99758 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA3Q99758 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.92■■□□□ 1.74
ABCA3Q99758 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms