Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 LSM12P1-201ENST00000411836 588 ntBASIC17.63■□□□□ 0.41
SNX18Q96RF0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX18Q96RF0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX18Q96RF0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 FZD10-202ENST00000539839 3282 ntBASIC17.62■□□□□ 0.41
SNX18Q96RF0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
SNX18Q96RF0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX18Q96RF0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX18Q96RF0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms