Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 AC112907.3-201ENST00000577781 2400 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 TUBB8P6-201ENST00000436895 1288 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 YBX1P10-201ENST00000444752 975 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 NUDT16P1-203ENST00000513809 620 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 KRT18P21-201ENST00000515767 1272 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 AP000525.1-201ENST00000608286 694 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 REXO1L10P-201ENST00000615707 1290 ntBASIC15.1■□□□□ 0.01
DUX3Q96PT4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
DUX3Q96PT4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX3Q96PT4 KRT16P1-201ENST00000399124 1418 ntBASIC15.09■□□□□ 0.01
DUX3Q96PT4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 AL691432.2-201ENST00000607222 2038 ntBASIC15.09■□□□□ 0.01
DUX3Q96PT4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 LINC01023-201ENST00000606054 436 ntBASIC15.09■□□□□ 0.01
DUX3Q96PT4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.09■□□□□ 0.01
DUX3Q96PT4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX3Q96PT4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.08■□□□□ 0.01
DUX3Q96PT4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
DUX3Q96PT4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
DUX3Q96PT4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
DUX3Q96PT4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DUX3Q96PT4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.08■□□□□ 0.01
DUX3Q96PT4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DUX3Q96PT4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.08■□□□□ 0
DUX3Q96PT4 MIR1238-201ENST00000408483 83 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 AL390955.1-201ENST00000428694 934 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 KSR1P1-201ENST00000446298 240 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 RBM17P1-201ENST00000453646 1190 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.08■□□□□ 0
DUX3Q96PT4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.08■□□□□ 0
DUX3Q96PT4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.08■□□□□ 0
DUX3Q96PT4 C1QL1P1-201ENST00000568105 661 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.08■□□□□ 0
DUX3Q96PT4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.08■□□□□ 0
DUX3Q96PT4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.08■□□□□ 0
DUX3Q96PT4 AL353708.3-201ENST00000610272 989 ntBASIC15.08■□□□□ 0
DUX3Q96PT4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
DUX3Q96PT4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
DUX3Q96PT4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
DUX3Q96PT4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms