Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 CROCCP5-201ENST00000436658 830 ntBASIC19.61■□□□□ 0.73
LRRC39Q96DD0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 AC091874.3-201ENST00000512672 1195 ntBASIC19.61■□□□□ 0.73
LRRC39Q96DD0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 KRT8P8-201ENST00000434750 1448 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AC104417.2-201ENST00000562989 1793 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AL137784.2-201ENST00000607332 1000 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AC006557.6-201ENST00000623071 864 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AP006587.1-201ENST00000534129 1502 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC39Q96DD0 AC006333.2-201ENST00000607957 2099 ntBASIC19.6■□□□□ 0.73
LRRC39Q96DD0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AC083906.2-201ENST00000511578 360 ntBASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.59■□□□□ 0.73
LRRC39Q96DD0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.59■□□□□ 0.73
LRRC39Q96DD0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LRRC39Q96DD0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 HLA-B-256ENST00000639848 1089 ntBASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 AL049812.1-201ENST00000432563 2267 ntBASIC19.58■□□□□ 0.72
LRRC39Q96DD0 AC124283.5-201ENST00000624661 1809 ntBASIC19.58■□□□□ 0.72
LRRC39Q96DD0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LRRC39Q96DD0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRRC39Q96DD0 AC120498.9-201ENST00000339021 3867 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms