Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 HCG24-202ENST00000414398 717 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 AC097658.1-201ENST00000475555 843 ntBASIC20.39■□□□□ 0.85
RNF25Q96BH1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 AC098934.4-201ENST00000564127 592 ntBASIC20.39■□□□□ 0.85
RNF25Q96BH1 AL138781.1-201ENST00000566567 1274 ntBASIC20.39■□□□□ 0.85
RNF25Q96BH1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RNF25Q96BH1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF25Q96BH1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF25Q96BH1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF25Q96BH1 RPS2P52-201ENST00000469610 820 ntBASIC20.38■□□□□ 0.85
RNF25Q96BH1 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 PAX6-247ENST00000638965 979 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF25Q96BH1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF25Q96BH1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF25Q96BH1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF25Q96BH1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 MYC-209ENST00000641252 345 ntBASIC20.37■□□□□ 0.85
RNF25Q96BH1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF25Q96BH1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 AC092368.3-202ENST00000574180 1591 ntBASIC20.37■□□□□ 0.85
RNF25Q96BH1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF25Q96BH1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF25Q96BH1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF25Q96BH1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 AL109923.1-201ENST00000618799 583 ntBASIC20.35■□□□□ 0.85
RNF25Q96BH1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms