Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 AC116562.4-201ENST00000641316 2276 ntBASIC18.32■□□□□ 0.52
TM9SF4Q92544 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 UNC93B2-201ENST00000285383 730 ntBASIC18.32■□□□□ 0.52
TM9SF4Q92544 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
TM9SF4Q92544 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM9SF4Q92544 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 NUDT16P1-203ENST00000513809 620 ntBASIC18.31■□□□□ 0.52
TM9SF4Q92544 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 AL031963.3-201ENST00000606441 850 ntBASIC18.31■□□□□ 0.52
TM9SF4Q92544 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TM9SF4Q92544 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF4Q92544 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 AC125437.2-201ENST00000625180 2167 ntBASIC18.3■□□□□ 0.52
TM9SF4Q92544 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF4Q92544 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF4Q92544 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms